RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 ZSCAN5DPP0CG00 497 aa16.95■□□□□ 0.3
CHCHD3-203ENST00000448878 PTGER1P34995 402 aa16.95■□□□□ 0.3
CHCHD3-203ENST00000448878 PTGS2P35354 604 aa16.95■□□□□ 0.3
CHCHD3-203ENST00000448878 RELAQ04206 551 aa16.95■□□□□ 0.3
CHCHD3-203ENST00000448878 GBX1Q14549 363 aa16.95■□□□□ 0.3
CHCHD3-203ENST00000448878 RNF187Q5TA31 235 aaPredicted RBP16.95■□□□□ 0.3
CHCHD3-203ENST00000448878 RPS19BP1Q86WX3 136 aaKnown RBP16.95■□□□□ 0.3
CHCHD3-203ENST00000448878 REXO1L1PQ8IX06 675 aa16.95■□□□□ 0.3
CHCHD3-203ENST00000448878 CYP4X1Q8N118 509 aa16.95■□□□□ 0.3
CHCHD3-203ENST00000448878 ACRBPQ8NEB7 543 aa16.95■□□□□ 0.3
CHCHD3-203ENST00000448878 LPGAT1Q92604 370 aa16.95■□□□□ 0.3
CHCHD3-203ENST00000448878 TMEM125Q96AQ2 219 aa16.95■□□□□ 0.3
CHCHD3-203ENST00000448878 MFSD3Q96ES6 412 aa16.95■□□□□ 0.3
CHCHD3-203ENST00000448878 ZNF559Q9BR84 538 aa16.95■□□□□ 0.3
CHCHD3-203ENST00000448878 IL22Q9GZX6 179 aa16.95■□□□□ 0.3
CHCHD3-203ENST00000448878 TMEM184CQ9NVA4 438 aa16.95■□□□□ 0.3
CHCHD3-203ENST00000448878 ASB1Q9Y576 335 aa16.95■□□□□ 0.3
CHCHD3-203ENST00000448878 CACNA1CQ13936 2221 aa16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 A0A1B0GTH9 108 aa16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 NKX2-6A6NCS4 301 aa16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 ZNF860A6NHJ4 632 aa16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 FOXO6A8MYZ6 492 aa16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 ADAM10O14672 748 aa16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 TFECO14948 347 aaPredicted RBP16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 CD99P14209 185 aa16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 MGAT1P26572 445 aa16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 NPY2RP49146 381 aa16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 CYB561P49447 251 aa16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 RPS15AP62244 130 aaKnown RBP16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 BASP1P80723 227 aaKnown RBP16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 CUL1Q13616 776 aa16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 USP10Q14694 798 aaKnown RBP16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 OASLQ15646 514 aaKnown RBP16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 TTLL9Q3SXZ7 439 aa16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 RNFT1Q5M7Z0 435 aa16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 SEL1L2Q5TEA6 688 aa16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 ZNF468Q5VIY5 522 aaPredicted RBP16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 CD163Q86VB7 1156 aa16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 CAMKVQ8NCB2 501 aa16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 ALKBH8Q96BT7 664 aaKnown RBP16.94■□□□□ 0.3
CHCHD3-203ENST00000448878 NF1P21359 2839 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 SCN3AQ9NY46 2000 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 FEZF1A0PJY2 475 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 USP27XA6NNY8 438 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 ZBTB14O43829 449 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 KIF5CO60282 957 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 NME2P1O60361 137 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 NME2P22392 152 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 TPP2P29144 1249 aaPredicted RBP16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 RFC3P40938 356 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 SLC26A5P58743 744 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 TMEM211Q6ICI0 200 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 TMEM214Q6NUQ4 689 aaKnown RBP16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 VN1R4Q7Z5H5 301 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 KIF2BQ8N4N8 673 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 KCT2Q8NC54 265 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 FAM57AQ8TBR7 257 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 ASB5Q8WWX0 329 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 TSLPQ969D9 159 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 CCDC138Q96M89 665 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 TCF12Q99081 682 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 OLFM1Q99784 485 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 UCK2Q9BZX2 261 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 DRG1Q9Y295 367 aaKnown RBP16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 REXO2Q9Y3B8 237 aaKnown RBP16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 NAALAD2Q9Y3Q0 740 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 HEATR5BQ9P2D3 2071 aa16.93■□□□□ 0.3
CHCHD3-203ENST00000448878 PRMT3O60678 531 aa16.92■□□□□ 0.3
CHCHD3-203ENST00000448878 PDE9AO76083 593 aa16.92■□□□□ 0.3
CHCHD3-203ENST00000448878 RPL22P35268 128 aaKnown RBP16.92■□□□□ 0.3
CHCHD3-203ENST00000448878 MEOX1P50221 254 aa16.92■□□□□ 0.3
CHCHD3-203ENST00000448878 TERF1P54274 439 aa16.92■□□□□ 0.3
CHCHD3-203ENST00000448878 GTF3C1Q12789 2109 aa16.92■□□□□ 0.3
CHCHD3-203ENST00000448878 MYBPHQ13203 477 aa16.92■□□□□ 0.3
CHCHD3-203ENST00000448878 TYSND1Q2T9J0 566 aa16.92■□□□□ 0.3
CHCHD3-203ENST00000448878 CES4AQ5XG92 561 aa16.92■□□□□ 0.3
CHCHD3-203ENST00000448878 FGD2Q7Z6J4 655 aa16.92■□□□□ 0.3
CHCHD3-203ENST00000448878 SLC26A11Q86WA9 606 aa16.92■□□□□ 0.3
CHCHD3-203ENST00000448878 CHERPQ8IWX8 916 aaKnown RBP16.92■□□□□ 0.3
CHCHD3-203ENST00000448878 PLPP5Q8NEB5 264 aa16.92■□□□□ 0.3
CHCHD3-203ENST00000448878 SLC13A3Q8WWT9 602 aa16.92■□□□□ 0.3
CHCHD3-203ENST00000448878 PANX2Q96RD6 677 aa16.92■□□□□ 0.3
CHCHD3-203ENST00000448878 FRMD8P1Q9BZ68 369 aaPredicted RBP16.92■□□□□ 0.3
CHCHD3-203ENST00000448878 CCDC68Q9H2F9 335 aa16.92■□□□□ 0.3
CHCHD3-203ENST00000448878 KCNJ16Q9NPI9 418 aa16.92■□□□□ 0.3
CHCHD3-203ENST00000448878 CCDC177Q9NQR7 707 aaPredicted RBP16.92■□□□□ 0.3
CHCHD3-203ENST00000448878 SYBUQ9NX95 663 aa16.92■□□□□ 0.3
CHCHD3-203ENST00000448878 CTAGE9A4FU28 777 aa16.91■□□□□ 0.3
CHCHD3-203ENST00000448878 MAGEB17A8MXT2 336 aa16.91■□□□□ 0.3
CHCHD3-203ENST00000448878 KLRC4-KLRK1H3BQV0 150 aa16.91■□□□□ 0.3
CHCHD3-203ENST00000448878 AP3B1O00203 1094 aa16.91■□□□□ 0.3
CHCHD3-203ENST00000448878 HRH2P25021 359 aa16.91■□□□□ 0.3
CHCHD3-203ENST00000448878 ARNTP27540 789 aa16.91■□□□□ 0.3
CHCHD3-203ENST00000448878 ITGA8P53708 1063 aa16.91■□□□□ 0.3
CHCHD3-203ENST00000448878 RHAGQ02094 409 aa16.91■□□□□ 0.3
CHCHD3-203ENST00000448878 RAD9BQ6WBX8 426 aa16.91■□□□□ 0.3
CHCHD3-203ENST00000448878 GSTA5Q7RTV2 222 aa16.91■□□□□ 0.3
CHCHD3-203ENST00000448878 ASPGQ86U10 573 aa16.91■□□□□ 0.3
CHCHD3-203ENST00000448878 PDSS2Q86YH6 399 aa16.91■□□□□ 0.3
CHCHD3-203ENST00000448878 SPNS2Q8IVW8 549 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms