RNA–Protein interactions for RNA: ENST00000402458.1

SNU13-204, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 3 BASIC

Gene SNU13, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-204ENST00000402458 NDUFA9Q16795 377 aa13.01□□□□□ -0.33
SNU13-204ENST00000402458 GGTA1PQ4G0N0 100 aa13.01□□□□□ -0.33
SNU13-204ENST00000402458 PWWP2BQ6NUJ5 590 aa13.01□□□□□ -0.33
SNU13-204ENST00000402458 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.01□□□□□ -0.33
SNU13-204ENST00000402458 OR4F6Q8NGB9 312 aa13.01□□□□□ -0.33
SNU13-204ENST00000402458 DYDC1Q8WWB3 177 aa13.01□□□□□ -0.33
SNU13-204ENST00000402458 CCT6BQ92526 530 aa13.01□□□□□ -0.33
SNU13-204ENST00000402458 CLIP3Q96DZ5 547 aa13.01□□□□□ -0.33
SNU13-204ENST00000402458 MOCOSQ96EN8 888 aa13.01□□□□□ -0.33
SNU13-204ENST00000402458 ZNF578Q96N58 590 aaPredicted RBP13.01□□□□□ -0.33
SNU13-204ENST00000402458 ZNF285Q96NJ3 590 aa13.01□□□□□ -0.33
SNU13-204ENST00000402458 CDK15Q96Q40 435 aa13.01□□□□□ -0.33
SNU13-204ENST00000402458 SPNS1Q9H2V7 528 aa13.01□□□□□ -0.33
SNU13-204ENST00000402458 ACTR5Q9H9F9 607 aaPredicted RBP13.01□□□□□ -0.33
SNU13-204ENST00000402458 MID1IP1Q9NPA3 183 aa13.01□□□□□ -0.33
SNU13-204ENST00000402458 STARD5Q9NSY2 213 aa13.01□□□□□ -0.33
SNU13-204ENST00000402458 SNX6Q9UNH7 406 aa13.01□□□□□ -0.33
SNU13-204ENST00000402458 RNF11Q9Y3C5 154 aa13.01□□□□□ -0.33
SNU13-204ENST00000402458 PCDHB3Q9Y5E6 796 aa13.01□□□□□ -0.33
SNU13-204ENST00000402458 HYKKA2RU49 373 aa13□□□□□ -0.33
SNU13-204ENST00000402458 FITM1A5D6W6 292 aa13□□□□□ -0.33
SNU13-204ENST00000402458 H0YIV9 168 aa13□□□□□ -0.33
SNU13-204ENST00000402458 PRAMEF4O60810 478 aa13□□□□□ -0.33
SNU13-204ENST00000402458 STK17BO94768 372 aa13□□□□□ -0.33
SNU13-204ENST00000402458 KIAA0754O94854 1291 aa13□□□□□ -0.33
SNU13-204ENST00000402458 ESRRBO95718 433 aa13□□□□□ -0.33
SNU13-204ENST00000402458 SERPINE1P05121 402 aa13□□□□□ -0.33
SNU13-204ENST00000402458 ENO1P06733 434 aaKnown RBP13□□□□□ -0.33
SNU13-204ENST00000402458 CD22P20273 847 aa13□□□□□ -0.33
SNU13-204ENST00000402458 NR1D1P20393 614 aa13□□□□□ -0.33
SNU13-204ENST00000402458 GRK2P25098 689 aa13□□□□□ -0.33
SNU13-204ENST00000402458 HMOX2P30519 316 aa13□□□□□ -0.33
SNU13-204ENST00000402458 EMP3P54852 163 aa13□□□□□ -0.33
SNU13-204ENST00000402458 STXBP1P61764 594 aaKnown RBP13□□□□□ -0.33
SNU13-204ENST00000402458 CYP4F2P78329 520 aa13□□□□□ -0.33
SNU13-204ENST00000402458 ZRSR2Q15696 482 aaKnown RBP13□□□□□ -0.33
SNU13-204ENST00000402458 MUM1Q2TAK8 710 aa13□□□□□ -0.33
SNU13-204ENST00000402458 PRTGQ2VWP7 1150 aa13□□□□□ -0.33
SNU13-204ENST00000402458 C10orf62Q5T681 223 aaPredicted RBP13□□□□□ -0.33
SNU13-204ENST00000402458 GARNL3Q5VVW2 1013 aa13□□□□□ -0.33
SNU13-204ENST00000402458 PRAMEF9Q5VWM5 478 aa13□□□□□ -0.33
SNU13-204ENST00000402458 ZCCHC23Q6ZST2 131 aa13□□□□□ -0.33
SNU13-204ENST00000402458 SYVN1Q86TM6 617 aa13□□□□□ -0.33
SNU13-204ENST00000402458 LAS2Q8IYD9 372 aa13□□□□□ -0.33
SNU13-204ENST00000402458 ARFGAP2Q8N6H7 521 aa13□□□□□ -0.33
SNU13-204ENST00000402458 ANKRD53Q8N9V6 530 aa13□□□□□ -0.33
SNU13-204ENST00000402458 OR7G3Q8NG95 312 aa13□□□□□ -0.33
SNU13-204ENST00000402458 SLC29A3Q9BZD2 475 aa13□□□□□ -0.33
SNU13-204ENST00000402458 RHBGQ9H310 441 aa13□□□□□ -0.33
SNU13-204ENST00000402458 ELOVL6Q9H5J4 265 aa13□□□□□ -0.33
SNU13-204ENST00000402458 ENAMQ9NRM1 1142 aa13□□□□□ -0.33
SNU13-204ENST00000402458 ZNF490Q9ULM2 529 aaPredicted RBP13□□□□□ -0.33
SNU13-204ENST00000402458 SPTBN2O15020 2390 aa13□□□□□ -0.33
SNU13-204ENST00000402458 MED19A0JLT2 244 aaPredicted RBP12.99□□□□□ -0.33
SNU13-204ENST00000402458 CDRT15L2A8MXV6 281 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 TMEM114B3SHH9 223 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 STMND1H3BQB6 276 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 CLEC3AO75596 197 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 OR4F21O95013 312 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 SNUPNO95149 360 aaKnown RBP12.99□□□□□ -0.33
SNU13-204ENST00000402458 KRT6AP02538 564 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 KRT6BP04259 564 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 NTRK1P04629 796 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 KLK3P07288 261 aaPredicted RBP12.99□□□□□ -0.33
SNU13-204ENST00000402458 CTSBP07858 339 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 SERPINA6P08185 405 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 CCNYL3P0C7X3 344 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 BGNP21810 368 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 ALAS2P22557 587 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 PIK3CBP42338 1070 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 KRT6CP48668 564 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 WDR4P57081 412 aaKnown RBP12.99□□□□□ -0.33
SNU13-204ENST00000402458 SKP1P63208 163 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 TGM3Q08188 693 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 GALNT1Q10472 559 aaPredicted RBP12.99□□□□□ -0.33
SNU13-204ENST00000402458 STX3Q13277 289 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 DDX39BQ13838 428 aaKnown RBP12.99□□□□□ -0.33
SNU13-204ENST00000402458 HKDC1Q2TB90 917 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 ATG16L1Q676U5 607 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 LETMD1Q6P1Q0 360 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 VN1R4Q7Z5H5 301 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 CDYL2Q8N8U2 506 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 RAB3IL1Q8TBN0 382 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 METTL6Q8TCB7 284 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 NT5CQ8TCD5 201 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 AGAP11Q8TF27 550 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 PMEPA1Q969W9 287 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 TM4SF19Q96DZ7 209 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 CENPKQ9BS16 269 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 ASCL3Q9NQ33 180 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 CUTCQ9NTM9 273 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 INTS9Q9NV88 658 aaKnown RBP12.99□□□□□ -0.33
SNU13-204ENST00000402458 FOXJ2Q9P0K8 574 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 NDOR1Q9UHB4 597 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 CDC14AQ9UNH5 594 aa12.99□□□□□ -0.33
SNU13-204ENST00000402458 RUVBL1Q9Y265 456 aaKnown RBP12.99□□□□□ -0.33
SNU13-204ENST00000402458 SPTBP11277 2137 aa12.98□□□□□ -0.33
SNU13-204ENST00000402458 H3BMH7 237 aa12.98□□□□□ -0.33
SNU13-204ENST00000402458 PPP6CO00743 305 aa12.98□□□□□ -0.33
SNU13-204ENST00000402458 FFAR3O14843 346 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms