RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 TOX2Q96NM4 488 aa17.32■□□□□ 0.36
PHF1-201ENST00000374512 RHNO1Q9BSD3 238 aa17.32■□□□□ 0.36
PHF1-201ENST00000374512 EBPLQ9BY08 206 aa17.32■□□□□ 0.36
PHF1-201ENST00000374512 CPEB1Q9BZB8 566 aaKnown RBP17.32■□□□□ 0.36
PHF1-201ENST00000374512 SUV39H2Q9H5I1 410 aa17.32■□□□□ 0.36
PHF1-201ENST00000374512 RUBCNLQ9H714 662 aa17.32■□□□□ 0.36
PHF1-201ENST00000374512 SIRT5Q9NXA8 310 aa17.32■□□□□ 0.36
PHF1-201ENST00000374512 CLEC4EQ9ULY5 219 aa17.32■□□□□ 0.36
PHF1-201ENST00000374512 RNF6Q9Y252 685 aa17.32■□□□□ 0.36
PHF1-201ENST00000374512 FAM32AQ9Y421 112 aaKnown RBP17.32■□□□□ 0.36
PHF1-201ENST00000374512 C1orf226A1L170 272 aa17.32■□□□□ 0.36
PHF1-201ENST00000374512 CKMP06732 381 aa17.32■□□□□ 0.36
PHF1-201ENST00000374512 ANXA8P13928 327 aa17.32■□□□□ 0.36
PHF1-201ENST00000374512 CTSKP43235 329 aa17.32■□□□□ 0.36
PHF1-201ENST00000374512 INAVAQ3KP66 663 aa17.32■□□□□ 0.36
PHF1-201ENST00000374512 CPTPQ5TA50 214 aa17.32■□□□□ 0.36
PHF1-201ENST00000374512 BBS7Q8IWZ6 715 aa17.32■□□□□ 0.36
PHF1-201ENST00000374512 C11orf65Q8NCR3 313 aa17.32■□□□□ 0.36
PHF1-201ENST00000374512 DNASE1L2Q92874 299 aa17.32■□□□□ 0.36
PHF1-201ENST00000374512 CLP1Q92989 425 aaKnown RBP17.32■□□□□ 0.36
PHF1-201ENST00000374512 CXorf40BQ96DE9 158 aa17.32■□□□□ 0.36
PHF1-201ENST00000374512 TPD52L3Q96J77 140 aa17.32■□□□□ 0.36
PHF1-201ENST00000374512 RAD9AQ99638 391 aa17.32■□□□□ 0.36
PHF1-201ENST00000374512 ERVK-11Q9UQG0 969 aa17.32■□□□□ 0.36
PHF1-201ENST00000374512 METTL15A6NJ78 407 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 CLCA1A8K7I4 914 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 AP2A2O94973 939 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 LAMP1P11279 417 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 ITPKAP23677 461 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 GABRR2P28476 465 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 SERPINB1P30740 379 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 CD70P32970 193 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 CYP4F8P98187 520 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 DNASE1L3Q13609 305 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 RGNQ15493 299 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 SLC22A16Q86VW1 577 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 KLHDC8AQ8IYD2 350 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 CLECL1Q8IZS7 167 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 DEPDC4Q8N2C3 294 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 ASZ1Q8WWH4 475 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 MRPS31Q92665 395 aaKnown RBP17.31■□□□□ 0.36
PHF1-201ENST00000374512 RPL3LQ92901 407 aaKnown RBP17.31■□□□□ 0.36
PHF1-201ENST00000374512 DPH2Q9BQC3 489 aaPredicted RBP17.31■□□□□ 0.36
PHF1-201ENST00000374512 EMILIN2Q9BXX0 1053 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 NXF2Q9GZY0 626 aaKnown RBP17.31■□□□□ 0.36
PHF1-201ENST00000374512 RNF208Q9H0X6 261 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 SCHIP1Q9P0W5 487 aaPredicted RBP17.31■□□□□ 0.36
PHF1-201ENST00000374512 CFAP97Q9P2B7 532 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 SPASTQ9UBP0 616 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 ZNF282Q9UDV7 671 aaPredicted RBP17.31■□□□□ 0.36
PHF1-201ENST00000374512 DENND4CQ5VZ89 1909 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 CDK1P06493 297 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 SPINT3P49223 89 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 SELENOWP63302 87 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 ZNF45Q02386 682 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 TRIM60Q495X7 471 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 XKR6Q5GH73 641 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 GRHL2Q6ISB3 625 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 GALNT10Q86SR1 603 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 VRK3Q8IV63 474 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 DNAJC22Q8N4W6 341 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 SCAIQ8N9R8 606 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 DENND6BQ8NEG7 585 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 KBTBD8Q8NFY9 601 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 CHTF18Q8WVB6 975 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 AUTS2Q8WXX7 1259 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 COQ8BQ96D53 544 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 MAFFQ9ULX9 164 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 VPS4AQ9UN37 437 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 POFUT2Q9Y2G5 429 aa17.31■□□□□ 0.36
PHF1-201ENST00000374512 AGAP5A6NIR3 686 aa17.3■□□□□ 0.36
PHF1-201ENST00000374512 RFPL2O75678 378 aa17.3■□□□□ 0.36
PHF1-201ENST00000374512 RRM2P31350 389 aa17.3■□□□□ 0.36
PHF1-201ENST00000374512 LIPAP38571 399 aa17.3■□□□□ 0.36
PHF1-201ENST00000374512 OLR1P78380 273 aa17.3■□□□□ 0.36
PHF1-201ENST00000374512 KRR1Q13601 381 aaKnown RBP17.3■□□□□ 0.36
PHF1-201ENST00000374512 EIF4HQ15056 248 aaKnown RBP17.3■□□□□ 0.36
PHF1-201ENST00000374512 TIGD6Q17RP2 521 aa17.3■□□□□ 0.36
PHF1-201ENST00000374512 FAM124AQ86V42 546 aa17.3■□□□□ 0.36
PHF1-201ENST00000374512 NPAS3Q8IXF0 933 aa17.3■□□□□ 0.36
PHF1-201ENST00000374512 UBE2FQ969M7 185 aa17.3■□□□□ 0.36
PHF1-201ENST00000374512 VOPP1Q96AW1 172 aa17.3■□□□□ 0.36
PHF1-201ENST00000374512 SH3KBP1Q96B97 665 aa17.3■□□□□ 0.36
PHF1-201ENST00000374512 ZNF689Q96CS4 500 aaPredicted RBP17.3■□□□□ 0.36
PHF1-201ENST00000374512 MYOCQ99972 504 aa17.3■□□□□ 0.36
PHF1-201ENST00000374512 HEPHQ9BQS7 1158 aa17.3■□□□□ 0.36
PHF1-201ENST00000374512 CCDC59Q9P031 241 aaKnown RBP17.3■□□□□ 0.36
PHF1-201ENST00000374512 LYVE1Q9Y5Y7 322 aa17.3■□□□□ 0.36
PHF1-201ENST00000374512 TNFRSF11BO00300 401 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 RPLP0P05388 317 aaKnown RBP17.29■□□□□ 0.36
PHF1-201ENST00000374512 GSTM1P09488 218 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 SRCP12931 536 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 LHCGRP22888 699 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 MAGEA10P43363 369 aaPredicted RBP17.29■□□□□ 0.36
PHF1-201ENST00000374512 CRYBA2P53672 197 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 SLC7A9P82251 487 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 SEMG2Q02383 582 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 SPIN4Q56A73 249 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 TOR1AIP1Q5JTV8 583 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 CATSPEREQ5SY80 951 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms