RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 CMTM7Q96FZ5 175 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 TCEAL2Q9H3H9 227 aaPredicted RBP11.6□□□□□ -0.55
USF1-203ENST00000368021 TM9SF3Q9HD45 589 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 CCDC167Q9P0B6 97 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 TAC3Q9UHF0 121 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 PPT2Q9UMR5 302 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 HEATR5BQ9P2D3 2071 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.6□□□□□ -0.55
USF1-203ENST00000368021 LNP1A1A4G5 178 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 ARHGAP10A1A4S6 786 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 PIPSLA2A3N6 862 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 FOXE1O00358 373 aaPredicted RBP11.6□□□□□ -0.55
USF1-203ENST00000368021 GSC2O15499 205 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 SEC22BO75396 215 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 SNRPB2P08579 225 aaKnown RBP11.6□□□□□ -0.55
USF1-203ENST00000368021 CDH1P12830 882 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 CTSEP14091 401 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 JUNDP17535 347 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 CXCR2P25025 360 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 RPL38P63173 70 aaKnown RBP11.6□□□□□ -0.55
USF1-203ENST00000368021 SLBPQ14493 270 aaKnown RBP eCLIP11.6□□□□□ -0.55
USF1-203ENST00000368021 AASDHQ4L235 1098 aaPredicted RBP11.6□□□□□ -0.55
USF1-203ENST00000368021 MFSD4BQ5TF39 518 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 PAOXQ6QHF9 649 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 FUNDC1Q8IVP5 155 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 KRT78Q8N1N4 520 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 LMNTD1Q8N9Z9 388 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 FBXO27Q8NI29 283 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 DHRS1Q96LJ7 313 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 C1orf50Q9BV19 199 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 GTPBP2Q9BX10 602 aaKnown RBP11.6□□□□□ -0.55
USF1-203ENST00000368021 CADM1Q9BY67 442 aaKnown RBP11.6□□□□□ -0.55
USF1-203ENST00000368021 TWSG1Q9GZX9 223 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 EFCAB1Q9HAE3 211 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 POT1Q9NUX5 634 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 NDE1Q9NXR1 346 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 VPS29Q9UBQ0 182 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 APOBEC3BQ9UH17 382 aaKnown RBP11.6□□□□□ -0.55
USF1-203ENST00000368021 EIF3LQ9Y262 564 aaKnown RBP11.6□□□□□ -0.55
USF1-203ENST00000368021 PCDHB11Q9Y5F2 797 aa11.6□□□□□ -0.55
USF1-203ENST00000368021 BBIP1A8MTZ0 92 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 PRICKLE3O43900 615 aaPredicted RBP11.59□□□□□ -0.55
USF1-203ENST00000368021 CD1EP15812 388 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 JAK1P23458 1154 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 MAPK1P28482 360 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 PIK3CBP42338 1070 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 CCR8P51685 355 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 ABATP80404 500 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 PRDX1Q06830 199 aaKnown RBP11.59□□□□□ -0.55
USF1-203ENST00000368021 DUOXA1Q1HG43 343 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 CACHD1Q5VU97 1274 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 IL23RQ5VWK5 629 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 BLOC1S3Q6QNY0 202 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 CYP20A1Q6UW02 462 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 GK5Q6ZS86 529 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 TAF8Q7Z7C8 310 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 FAM9CQ8IZT9 166 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 C2orf73Q8N5S3 287 aaPredicted RBP11.59□□□□□ -0.55
USF1-203ENST00000368021 OR4K1Q8NGD4 311 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 OR9I1Q8NGQ6 314 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 OR2A1Q8NGT9 310 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 OR2I1PQ8NGU4 316 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 HUS1BQ8NHY5 278 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 UTP4Q969X6 686 aaKnown RBP11.59□□□□□ -0.55
USF1-203ENST00000368021 FCRL1Q96LA6 429 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 MTERF1Q99551 399 aaKnown RBP11.59□□□□□ -0.55
USF1-203ENST00000368021 NRTNQ99748 197 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 LRRC61Q9BV99 259 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 ACAT2Q9BWD1 397 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 MRPL1Q9BYD6 325 aaKnown RBP11.59□□□□□ -0.55
USF1-203ENST00000368021 ADGRE2Q9UHX3 823 aa11.59□□□□□ -0.55
USF1-203ENST00000368021 A0A1B0GVG6 124 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 DYTNA2CJ06 578 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 ANKRD28O15084 1053 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 VILLO15195 856 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 LRP3O75074 770 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 SLC22A3O75751 556 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 G6PDP11413 515 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 HOXD12P35452 270 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 CCT8P50990 548 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 NXPH1P58417 271 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 UBE2IP63279 158 aaKnown RBP11.58□□□□□ -0.56
USF1-203ENST00000368021 SLC34A1Q06495 639 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 RCAN2Q14206 197 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 ELOCQ15369 112 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 TCEA2Q15560 299 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 BCL2A1Q16548 175 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 ZNF542PQ5EBM4 170 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 PRRT3Q5FWE3 981 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 COQ5Q5HYK3 327 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 SLC23A3Q6PIS1 610 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 TMIGD1Q6UXZ0 262 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 AMIGO1Q86WK6 493 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 PEX5LQ8IYB4 626 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 KYQ8NBH2 561 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 PROKR1Q8TCW9 393 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 LCN9Q8WX39 176 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 MCUR1Q96AQ8 359 aa11.58□□□□□ -0.56
USF1-203ENST00000368021 DGCR14Q96DF8 476 aaKnown RBP11.58□□□□□ -0.56
USF1-203ENST00000368021 C11orf24Q96F05 449 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms