RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 C6orf136Q5SQH8 315 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 OGFOD2Q6N063 350 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 TMEM26Q6ZUK4 368 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 KANSL1Q7Z3B3 1105 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 C17orf64Q86WR6 236 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 TRIM48Q8IWZ4 208 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 ARL14Q8N4G2 192 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 RAB42Q8N4Z0 105 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 CPSF7Q8N684 471 aaKnown RBP14.11□□□□□ -0.15
CXCL12-201ENST00000343575 OR4K1Q8NGD4 311 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 CCT7Q99832 543 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 PCBD2Q9H0N5 130 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 SRMSQ9H3Y6 488 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 CAPN10Q9HC96 672 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 SLC6A20Q9NP91 592 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 TBCCD1Q9NVR7 557 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 SUSD2Q9UGT4 822 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 PCDHB11Q9Y5F2 797 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 COPG1Q9Y678 874 aaKnown RBP14.11□□□□□ -0.15
CXCL12-201ENST00000343575 GOLGA4Q13439 2230 aaKnown RBP14.11□□□□□ -0.15
CXCL12-201ENST00000343575 ADAMTS9Q9P2N4 1935 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 GPR179Q6PRD1 2367 aa14.11□□□□□ -0.15
CXCL12-201ENST00000343575 SERTM1A2A2V5 107 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 PIPSLA2A3N6 862 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 H7BY64 318 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 KRT6AP02538 564 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 KRT6BP04259 564 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 FAM58BPP0C7Q3 252 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 FASLGP48023 281 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 KRT6CP48668 564 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 VN1R5Q7Z5H4 357 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 SLC9B2Q86UD5 537 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 TRIM73Q86UV7 250 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 LAS2Q8IYD9 372 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 SDR16C5Q8N3Y7 309 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 GPR156Q8NFN8 814 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 OR2L3Q8NG85 312 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 SELENOMQ8WWX9 145 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 PRAP1Q96NZ9 151 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 EFCAB11Q9BUY7 163 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 IL21RQ9HBE5 538 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 SNX6Q9UNH7 406 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 PCDHGA2Q9Y5H1 932 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 UBDO15205 165 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 ZSCAN9O15535 394 aaPredicted RBP14.1□□□□□ -0.15
CXCL12-201ENST00000343575 ETHE1O95571 254 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 TBX6O95947 436 aaPredicted RBP14.1□□□□□ -0.15
CXCL12-201ENST00000343575 SLC2A4P14672 509 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 LBPP18428 481 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 DIO3P55073 304 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 CSNK1G2P78368 415 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 GRIK2Q13002 908 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 APOFQ13790 326 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 KIAA0040Q15053 153 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 LPAL2Q16609 132 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 RFTN2Q52LD8 501 aaPredicted RBP14.1□□□□□ -0.15
CXCL12-201ENST00000343575 KIAA1614Q5VZ46 1190 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 MAGEB10Q96LZ2 347 aaPredicted RBP14.1□□□□□ -0.15
CXCL12-201ENST00000343575 OR2A14Q96R47 310 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 MTERF1Q99551 399 aaKnown RBP14.1□□□□□ -0.15
CXCL12-201ENST00000343575 ELOVL6Q9H5J4 265 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 SYNPO2LQ9H987 977 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 CSNK1G3Q9Y6M4 447 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 PCDH15Q96QU1 1955 aa14.1□□□□□ -0.15
CXCL12-201ENST00000343575 OR6C74A6NCV1 312 aa14.09□□□□□ -0.15
CXCL12-201ENST00000343575 PDE5AO76074 875 aa14.09□□□□□ -0.15
CXCL12-201ENST00000343575 ANXA6P08133 673 aa14.09□□□□□ -0.15
CXCL12-201ENST00000343575 PLCL1Q15111 1095 aa14.09□□□□□ -0.15
CXCL12-201ENST00000343575 HLA-BQ31612 363 aa14.09□□□□□ -0.15
CXCL12-201ENST00000343575 NADK2Q4G0N4 442 aa14.09□□□□□ -0.15
CXCL12-201ENST00000343575 MED27Q6P2C8 311 aa14.09□□□□□ -0.15
CXCL12-201ENST00000343575 ZNF438Q7Z4V0 828 aa14.09□□□□□ -0.15
CXCL12-201ENST00000343575 TICAM1Q8IUC6 712 aa14.09□□□□□ -0.15
CXCL12-201ENST00000343575 POU5F2Q8N7G0 328 aa14.09□□□□□ -0.15
CXCL12-201ENST00000343575 ANKRD53Q8N9V6 530 aa14.09□□□□□ -0.15
CXCL12-201ENST00000343575 HUS1BQ8NHY5 278 aa14.09□□□□□ -0.15
CXCL12-201ENST00000343575 CCDC124Q96CT7 223 aaKnown RBP14.09□□□□□ -0.15
CXCL12-201ENST00000343575 PELI2Q9HAT8 420 aa14.09□□□□□ -0.15
CXCL12-201ENST00000343575 MRGBPQ9NV56 204 aa14.09□□□□□ -0.15
CXCL12-201ENST00000343575 DOLKQ9UPQ8 538 aa14.09□□□□□ -0.15
CXCL12-201ENST00000343575 KLHL20Q9Y2M5 609 aa14.09□□□□□ -0.15
CXCL12-201ENST00000343575 PCDHGA11Q9Y5H2 935 aa14.09□□□□□ -0.15
CXCL12-201ENST00000343575 AK5Q9Y6K8 562 aa14.09□□□□□ -0.15
CXCL12-201ENST00000343575 A0A1B0GTQ1 180 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 MAGEB17A8MXT2 336 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 NPIPB8E9PQR5 432 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 HNRNPRO43390 633 aaKnown RBP14.08□□□□□ -0.16
CXCL12-201ENST00000343575 LCMT2O60294 686 aaKnown RBP14.08□□□□□ -0.16
CXCL12-201ENST00000343575 KDM1AO60341 852 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 VPS4BO75351 444 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 PGM3O95394 542 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 HOXB3P14651 431 aaPredicted RBP14.08□□□□□ -0.16
CXCL12-201ENST00000343575 POLR2CP19387 275 aaPredicted RBP14.08□□□□□ -0.16
CXCL12-201ENST00000343575 HOXD12P35452 270 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 PPP1CAP62136 330 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 KLF10Q13118 480 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 HERC3Q15034 1050 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 DUOXA1Q1HG43 343 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 AP5B1Q2VPB7 878 aa14.08□□□□□ -0.16
CXCL12-201ENST00000343575 PRR23BQ6ZRT6 265 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 968.7 ms