RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 FZD3Q9NPG1 666 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 CXXC1Q9P0U4 656 aaPredicted RBP12.1□□□□□ -0.47
UBXN4-201ENST00000272638 ZNF99A8MXY4 864 aaPredicted RBP12.1□□□□□ -0.47
UBXN4-201ENST00000272638 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.1□□□□□ -0.47
UBXN4-201ENST00000272638 IL3P08700 152 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 JUPP14923 745 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 MYOGP15173 224 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 ZNF8P17098 575 aaPredicted RBP12.1□□□□□ -0.47
UBXN4-201ENST00000272638 RPS7P62081 194 aaKnown RBP12.1□□□□□ -0.47
UBXN4-201ENST00000272638 CREMQ03060 361 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 DEPDC1Q5TB30 811 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 ZDHHC20Q5W0Z9 365 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 ASTLQ6HA08 431 aaPredicted RBP12.1□□□□□ -0.47
UBXN4-201ENST00000272638 VITQ6UXI7 678 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 TMEM145Q8NBT3 493 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 RNF31Q96EP0 1072 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 ART5Q96L15 291 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 ZSWIM3Q96MP5 696 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 ZNF641Q96N77 438 aaPredicted RBP12.1□□□□□ -0.47
UBXN4-201ENST00000272638 NPLQ9BXD5 320 aaPredicted RBP12.1□□□□□ -0.47
UBXN4-201ENST00000272638 C11orf49Q9H6J7 331 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 GIMAP4Q9NUV9 329 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 SLC25A37Q9NYZ2 338 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 ABCD2Q9UBJ2 740 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 AP3M1Q9Y2T2 418 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 ZNF638Q14966 1978 aaKnown RBP12.1□□□□□ -0.47
UBXN4-201ENST00000272638 SEC16AO15027 2179 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 A0A096LPI6 279 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 UGT2B11O75310 529 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 MT-ND2P03891 347 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 CBSLP0DN79 551 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 CBSP35520 551 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 NRIP1P48552 1158 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 RUNX1T1Q06455 604 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 RUNDC3AQ59EK9 446 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 CEACAM20Q6UY09 585 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 HDDC3Q8N4P3 179 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 TERB1Q8NA31 727 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 POC5Q8NA72 575 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 SLC43A3Q8NBI5 491 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 OR5AR1Q8NGP9 310 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 ASB11Q8WXH4 323 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 NUAK2Q9H093 628 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 IL21Q9HBE4 155 aa12.1□□□□□ -0.47
UBXN4-201ENST00000272638 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.09□□□□□ -0.47
UBXN4-201ENST00000272638 H3BMQ9 156 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 K7ESM1 405 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 PSMD11O00231 422 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 ABCB7O75027 752 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 ACPPP15309 386 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 TIMP2P16035 220 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 CEBPBP17676 345 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 FSHRP23945 695 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 DNAJA1P31689 397 aaKnown RBP12.09□□□□□ -0.47
UBXN4-201ENST00000272638 TUBA4AP68366 448 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 CDK6Q00534 326 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 KLHL35Q6PF15 583 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 FAM43BQ6ZT52 329 aaPredicted RBP12.09□□□□□ -0.47
UBXN4-201ENST00000272638 HTR3DQ70Z44 454 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 UBE2J2Q8N2K1 259 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 ZNF548Q8NEK5 533 aaPredicted RBP12.09□□□□□ -0.47
UBXN4-201ENST00000272638 WDR36Q8NI36 951 aaKnown RBP12.09□□□□□ -0.47
UBXN4-201ENST00000272638 STARD8Q92502 1023 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 BORCS5Q969J3 196 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 COG8Q96MW5 612 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 SEMA3GQ9NS98 782 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 ZCCHC3Q9NUD5 404 aaKnown RBP12.09□□□□□ -0.47
UBXN4-201ENST00000272638 DNMT3BQ9UBC3 853 aaKnown RBP12.09□□□□□ -0.47
UBXN4-201ENST00000272638 CNOT11Q9UKZ1 510 aaKnown RBP12.09□□□□□ -0.47
UBXN4-201ENST00000272638 TRBC2A0A5B9 178 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 NME6O75414 186 aaPredicted RBP12.09□□□□□ -0.47
UBXN4-201ENST00000272638 GADD45GO95257 159 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 C6P13671 934 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 CDC42P60953 191 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 TOP3AQ13472 1001 aaPredicted RBP12.09□□□□□ -0.47
UBXN4-201ENST00000272638 INAQ16352 499 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 IFI44LQ53G44 452 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 PARS2Q7L3T8 475 aaKnown RBP12.09□□□□□ -0.47
UBXN4-201ENST00000272638 OLIG3Q7RTU3 272 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 WDR48Q8TAF3 677 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 FEVQ99581 238 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 C17orf62Q9BQA9 187 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 AIF1LQ9BQI0 150 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 FUNDC2Q9BWH2 189 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 GSAPA4D1B5 854 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 GABRR3A8MPY1 467 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 IFNW1P05000 195 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 MATN1P21941 496 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 PSMB5P28074 263 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 FEN1P39748 380 aaKnown RBP12.09□□□□□ -0.47
UBXN4-201ENST00000272638 HLCSP50747 726 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 NCS1P62166 190 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 RPP38P78345 283 aaKnown RBP12.09□□□□□ -0.47
UBXN4-201ENST00000272638 GPNMBQ14956 572 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 COQ5Q5HYK3 327 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 PLEKHS1Q5SXH7 462 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 ERICH5Q6P6B1 374 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 COMMD6Q7Z4G1 85 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 NLGN4XQ8N0W4 816 aa12.09□□□□□ -0.47
UBXN4-201ENST00000272638 CLIP3Q96DZ5 547 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms