RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 DBX2Q6ZNG2 339 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 TREML1Q86YW5 311 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 MINDY1Q8N5J2 469 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 MFSD9Q8NBP5 474 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 OR6C4Q8NGE1 309 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 ZUFSPQ96AP4 578 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 C11orf24Q96F05 449 aaPredicted RBP14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 METTL2AQ96IZ6 378 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 APOLD1Q96LR9 279 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 PPM1MQ96MI6 270 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 MTERF1Q99551 399 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 PRRX2Q99811 253 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 LRTM1Q9HBL6 345 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 AIG1Q9NVV5 245 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 C1orf109Q9NX04 203 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 ARMCX1Q9P291 453 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 G3BP2Q9UN86 482 aaKnown RBP14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 KLHL20Q9Y2M5 609 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 PCDHGB2Q9Y5G2 931 aa14.13□□□□□ -0.15
SHKBP1-211ENST00000595945 ADAMTS20P59510 1910 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 IGHV1OR21-1A0A087WYE8 117 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 B4GAT1O43505 415 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 UBOX5O94941 541 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 MYF5P13349 255 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 HOXB3P14651 431 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 ACPPP15309 386 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 AMD1P17707 334 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 MAGP20916 626 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 GSTM2P28161 218 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 AHRP35869 848 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 DIO3P55073 304 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 PHEXP78562 749 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 BIRC2Q13490 618 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 SQLEQ14534 574 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 RBBP5Q15291 538 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 NR0B2Q15466 257 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 ZIC1Q15915 447 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 PROX2Q3B8N5 592 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 RFTN2Q52LD8 501 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 ARMC6Q6NXE6 501 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 ADCK2Q7Z695 626 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 PLD3Q8IV08 490 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 TTLQ8NG68 377 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 BAHD1Q8TBE0 780 aaPredicted RBP14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 CREB3L4Q8TEY5 395 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 MARK4Q96L34 752 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 SERPINI1Q99574 410 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 GTPBP2Q9BX10 602 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 MS4A8Q9BY19 250 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 BRINP2Q9C0B6 783 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 SYNPO2LQ9H987 977 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 DNAAF2Q9NVR5 837 aaKnown RBP14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 SIRT5Q9NXA8 310 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 VPS29Q9UBQ0 182 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 PILRAQ9UKJ1 303 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 GPR45Q9Y5Y3 372 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 AP1M2Q9Y6Q5 423 aa14.12□□□□□ -0.15
SHKBP1-211ENST00000595945 ZW10O43264 779 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 OR1F1O43749 312 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 CLEC3AO75596 197 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 ZNF806P0C7X5 589 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 GPX3P22352 226 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 GRK3P35626 688 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 OR1D5P58170 312 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 RPS15AP62244 130 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 RPL38P63173 70 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 TBL3Q12788 808 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 KLF10Q13118 480 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 MAD2L1Q13257 205 aaPredicted RBP14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 SQSTM1Q13501 440 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 CUL3Q13618 768 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 GSTA3Q16772 222 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 RIF1Q5UIP0 2472 aaKnown RBP14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 FBXO42Q6P3S6 717 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 TBC1D19Q8N5T2 526 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 EID2Q8N6I1 236 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 FNDC5Q8NAU1 212 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 CHTF18Q8WVB6 975 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 CCDC74AQ96AQ1 378 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 THAP11Q96EK4 314 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 APIPQ96GX9 242 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 TRAPPC9Q96Q05 1148 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 SEMA6CQ9H3T2 930 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 MRGBPQ9NV56 204 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 ARL8BQ9NVJ2 186 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 SCN3AQ9NY46 2000 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 SLC12A4Q9UP95 1085 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 TMED5Q9Y3A6 229 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 PCDHGA4Q9Y5G9 962 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 CAPN7Q9Y6W3 813 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 WDFY4Q6ZS81 3184 aa14.11□□□□□ -0.15
SHKBP1-211ENST00000595945 SEC16AO15027 2179 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 LNP1A1A4G5 178 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 EME2A4GXA9 379 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 ANKDD1BA6NHY2 528 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 PCNX2A6NKB5 2137 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 CTSVO60911 334 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 SEC22BO75396 215 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 SEMA3DO95025 777 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 C9P02748 559 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 188.3 ms