RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 A0A087X1B8 175 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 A0A0A6YYC8 382 aaPredicted RBP11.25□□□□□ -0.61
RAB5C-204ENST00000547517 SUPT3HB4E1H0 165 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 POC1B-GALNT4F8VUJ3 575 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 I3L1I5 382 aaPredicted RBP11.25□□□□□ -0.61
RAB5C-204ENST00000547517 NDUFS4O43181 175 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 OR1F1O43749 312 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 LCMT2O60294 686 aaKnown RBP11.25□□□□□ -0.61
RAB5C-204ENST00000547517 SUPT3HO75486 399 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 ONECUT2O95948 504 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 ALBP02768 609 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 ALDOAP04075 364 aaKnown RBP11.25□□□□□ -0.61
RAB5C-204ENST00000547517 SLC35G6P0C7Q6 338 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 SFTPCP11686 197 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 SLC6A12P48065 614 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 HSPA7P48741 367 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 SNRPNP63162 240 aaKnown RBP11.25□□□□□ -0.61
RAB5C-204ENST00000547517 REEP5Q00765 189 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 C19orf57Q0VDD7 668 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 NKG7Q16617 165 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 NDUFA9Q16795 377 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 GARNL3Q5VVW2 1013 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 TAOK1Q7L7X3 1001 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 APLFQ8IW19 511 aaPredicted RBP11.25□□□□□ -0.61
RAB5C-204ENST00000547517 TCAIMQ8N3R3 496 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 ARHGEF39Q8N4T4 335 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 MFSD9Q8NBP5 474 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 CAMKVQ8NCB2 501 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 ZNF740Q8NDX6 193 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 NXNL1Q96CM4 212 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 THAP11Q96EK4 314 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 MVB12AQ96EY5 273 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 MMABQ96EY8 250 aaPredicted RBP11.25□□□□□ -0.61
RAB5C-204ENST00000547517 SPSB2Q99619 263 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 YIPF2Q9BWQ6 316 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 ING2Q9H160 280 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 SLC26A1Q9H2B4 701 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 WDR54Q9H977 334 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 PELI2Q9HAT8 420 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 NMRAL1Q9HBL8 299 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 ACSS2Q9NR19 701 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 TRPC4Q9UBN4 977 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 ZNF282Q9UDV7 671 aaPredicted RBP11.25□□□□□ -0.61
RAB5C-204ENST00000547517 TUBD1Q9UJT1 453 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 NXT1Q9UKK6 140 aaKnown RBP11.25□□□□□ -0.61
RAB5C-204ENST00000547517 CDC14AQ9UNH5 594 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 ACOT9Q9Y305 439 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 KCNE2Q9Y6J6 123 aa11.25□□□□□ -0.61
RAB5C-204ENST00000547517 A0A096LPK6 155 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 EXOC1LA0A1B0GW35 172 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 TRBC2A0A5B9 178 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 MKRN2OSH3BPM6 223 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 UBXN8O00124 270 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 TAPBPO15533 448 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 PRPF4O43172 522 aaKnown RBP eCLIP11.24□□□□□ -0.61
RAB5C-204ENST00000547517 FOXS1O43638 330 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 KERAO60938 352 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 SERPIND1P05546 499 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 C2P06681 752 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 FAM153BP0C7A2 387 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 IL1RNP18510 177 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 NR1D1P20393 614 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 VARSP26640 1264 aaKnown RBP11.24□□□□□ -0.61
RAB5C-204ENST00000547517 TYK2P29597 1187 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 MSH2P43246 934 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 GLRBP48167 497 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 MAT1AQ00266 395 aaKnown RBP11.24□□□□□ -0.61
RAB5C-204ENST00000547517 OCA2Q04671 838 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 CDC16Q13042 620 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 DSG2Q14126 1118 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 SSPNQ14714 243 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 SYT16Q17RD7 645 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 FAM153CQ494X1 144 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 SULT1C3Q6IMI6 304 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 TMEM214Q6NUQ4 689 aaKnown RBP11.24□□□□□ -0.61
RAB5C-204ENST00000547517 NXPE4Q6UWF7 544 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 PRSS41Q7RTY9 318 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 PPP1R32Q7Z5V6 425 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 CCDC91Q7Z6B0 441 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 ISCA2Q86U28 154 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 KLHDC8AQ8IYD2 350 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 CENPLQ8N0S6 344 aaPredicted RBP11.24□□□□□ -0.61
RAB5C-204ENST00000547517 TBC1D19Q8N5T2 526 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 AMER3Q8N944 861 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 SNX31Q8N9S9 440 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 KCT2Q8NC54 265 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 PDPRQ8NCN5 879 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 OR4K1Q8NGD4 311 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 OR9A4Q8NGU2 314 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 STAG3L4Q8TBR4 150 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 STT3BQ8TCJ2 826 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 SLC13A3Q8WWT9 602 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 ESAMQ96AP7 390 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 MIEF2Q96C03 454 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 ABHD17AQ96GS6 310 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 AIF1LQ9BQI0 150 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 CRB3Q9BUF7 120 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 SLC25A18Q9H1K4 315 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 VPS11Q9H270 941 aa11.24□□□□□ -0.61
RAB5C-204ENST00000547517 CNOT10Q9H9A5 744 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms