RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 IL1RNP18510 177 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 NR1D1P20393 614 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 KCNC1P48547 511 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 SERPINB8P50452 374 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 CDKL1Q00532 357 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 ATP1A4Q13733 1029 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 SSPNQ14714 243 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 ZKSCAN8Q15776 578 aaPredicted RBP10.52□□□□□ -0.73
DDB1-222ENST00000543627 NKG7Q16617 165 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 FAM83EQ2M2I3 478 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 PRTGQ2VWP7 1150 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 VWA2Q5GFL6 755 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 SULT1C3Q6IMI6 304 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 KLC3Q6P597 504 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 NXPE4Q6UWF7 544 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 RELL1Q8IUW5 271 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 TCAIMQ8N3R3 496 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 KCT2Q8NC54 265 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 CAMKVQ8NCB2 501 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 OR9A4Q8NGU2 314 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 UBLCP1Q8WVY7 318 aaPredicted RBP10.52□□□□□ -0.73
DDB1-222ENST00000543627 SLC44A1Q8WWI5 657 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 THAP4Q8WY91 577 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 KIAA1191Q96A73 305 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 ABHD17AQ96GS6 310 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 C10orf90Q96M02 699 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 ZNF285Q96NJ3 590 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 AIF1LQ9BQI0 150 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 FAM117AQ9C073 453 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 DRC3Q9H069 523 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 ING2Q9H160 280 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 SPNS1Q9H2V7 528 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 CNOT10Q9H9A5 744 aaKnown RBP10.52□□□□□ -0.73
DDB1-222ENST00000543627 CPSF2Q9P2I0 782 aaKnown RBP10.52□□□□□ -0.73
DDB1-222ENST00000543627 CTSFQ9UBX1 484 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.52□□□□□ -0.73
DDB1-222ENST00000543627 MRPS2Q9Y399 296 aaKnown RBP10.52□□□□□ -0.73
DDB1-222ENST00000543627 ANGPTL3Q9Y5C1 460 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 HEMK1Q9Y5R4 338 aaPredicted RBP10.52□□□□□ -0.73
DDB1-222ENST00000543627 V9GYY5 206 aaPredicted RBP10.52□□□□□ -0.73
DDB1-222ENST00000543627 ATMQ13315 3056 aa10.52□□□□□ -0.73
DDB1-222ENST00000543627 CCDC88CQ9P219 2028 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 ZNF860A6NHJ4 632 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 SMIM23A6NLE4 172 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 TRIM49D1C9J1S8 452 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 MKRN2OSH3BPM6 223 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 SGK494L7N484 410 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 ALOX12BO75342 701 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 RFPL1O75677 317 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 STK16O75716 305 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 KLF7O75840 302 aaPredicted RBP10.51□□□□□ -0.73
DDB1-222ENST00000543627 KRT38O76015 456 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 WISP3O95389 354 aaPredicted RBP10.51□□□□□ -0.73
DDB1-222ENST00000543627 HEXBP07686 556 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 SLC35G6P0C7Q6 338 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 SFTPCP11686 197 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 ITGAXP20702 1163 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 ARL1P40616 181 aaPredicted RBP10.51□□□□□ -0.73
DDB1-222ENST00000543627 AGTR2P50052 363 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 SERPINB9P50453 376 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 CDC16Q13042 620 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 SLC29A2Q14542 456 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 RBBP7Q16576 425 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 XKR6Q5GH73 641 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 LGSNQ5TDP6 509 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 MRPL14Q6P1L8 145 aaKnown RBP10.51□□□□□ -0.73
DDB1-222ENST00000543627 PRMT9Q6P2P2 845 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 COX15Q7KZN9 410 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 TRMT10CQ7L0Y3 403 aaKnown RBP10.51□□□□□ -0.73
DDB1-222ENST00000543627 PRSS41Q7RTY9 318 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 VN1R4Q7Z5H5 301 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 ISCA2Q86U28 154 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 MYLK4Q86YV6 388 aaPredicted RBP10.51□□□□□ -0.73
DDB1-222ENST00000543627 MFSD9Q8NBP5 474 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 OR2Y1Q8NGV0 311 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 C9orf43Q8TAL5 461 aaPredicted RBP10.51□□□□□ -0.73
DDB1-222ENST00000543627 STT3BQ8TCJ2 826 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 THAP11Q96EK4 314 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 MOCOSQ96EN8 888 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 WBP1Q96G27 269 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 UBXN10Q96LJ8 280 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 TMEM79Q9BSE2 394 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 CRB3Q9BUF7 120 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 TRIM55Q9BYV6 548 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 ANKHQ9HCJ1 492 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 IGSF5Q9NSI5 407 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 DNAJC11Q9NVH1 559 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 ZNF358Q9NW07 568 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 GEMIN8Q9NWZ8 242 aaKnown RBP10.51□□□□□ -0.73
DDB1-222ENST00000543627 HCN3Q9P1Z3 774 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 ZNF282Q9UDV7 671 aaPredicted RBP10.51□□□□□ -0.73
DDB1-222ENST00000543627 TBK1Q9UHD2 729 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 HEATR5BQ9P2D3 2071 aa10.51□□□□□ -0.73
DDB1-222ENST00000543627 SEC16AO15027 2179 aa10.5□□□□□ -0.73
DDB1-222ENST00000543627 IGSF10Q6WRI0 2623 aa10.5□□□□□ -0.73
DDB1-222ENST00000543627 TRBC2A0A5B9 178 aa10.5□□□□□ -0.73
DDB1-222ENST00000543627 HMX2A2RU54 273 aa10.5□□□□□ -0.73
DDB1-222ENST00000543627 TK2O00142 265 aa10.5□□□□□ -0.73
DDB1-222ENST00000543627 PRPF4O43172 522 aaKnown RBP eCLIP10.5□□□□□ -0.733e-7■□□□□ 8.7
DDB1-222ENST00000543627 RIPK2O43353 540 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms