RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 OR5M3Q8NGP4 307 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 OR10Q1Q8NGQ4 319 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 OR9A4Q8NGU2 314 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 OR51Q1Q8NH59 317 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 SMPDL3AQ92484 453 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 SEC16BQ96JE7 1060 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 REPIN1Q9BWE0 567 aaKnown RBP11.82□□□□□ -0.52
DDX41-215ENST00000512431 CLEC4MQ9H2X3 399 aaPredicted RBP11.82□□□□□ -0.52
DDX41-215ENST00000512431 LIME1Q9H400 295 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 PCYOX1Q9UHG3 505 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 PLEKHA6Q9Y2H5 1048 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 HRH3Q9Y5N1 445 aa11.82□□□□□ -0.52
DDX41-215ENST00000512431 PRRC2AP48634 2157 aaKnown RBP11.82□□□□□ -0.52
DDX41-215ENST00000512431 A0A0U1RQJ8 604 aa11.81□□□□□ -0.52
DDX41-215ENST00000512431 KRT87PA6NCN2 255 aa11.81□□□□□ -0.52
DDX41-215ENST00000512431 PRMT5O14744 637 aaPredicted RBP11.81□□□□□ -0.52
DDX41-215ENST00000512431 HS6ST1O60243 411 aa11.81□□□□□ -0.52
DDX41-215ENST00000512431 NSA2O95478 260 aaKnown RBP11.81□□□□□ -0.52
DDX41-215ENST00000512431 TFEBP19484 476 aa11.81□□□□□ -0.52
DDX41-215ENST00000512431 TPP2P29144 1249 aaPredicted RBP11.81□□□□□ -0.52
DDX41-215ENST00000512431 RELAQ04206 551 aa11.81□□□□□ -0.52
DDX41-215ENST00000512431 PRDX1Q06830 199 aaKnown RBP11.81□□□□□ -0.52
DDX41-215ENST00000512431 TCEAL1Q15170 157 aa11.81□□□□□ -0.52
DDX41-215ENST00000512431 P3H1Q32P28 736 aa11.81□□□□□ -0.52
DDX41-215ENST00000512431 ANKRD20A4Q4UJ75 823 aa11.81□□□□□ -0.52
DDX41-215ENST00000512431 SFT2D3Q587I9 215 aa11.81□□□□□ -0.52
DDX41-215ENST00000512431 SUSD1Q6UWL2 747 aa11.81□□□□□ -0.52
DDX41-215ENST00000512431 ZZZ3Q8IYH5 903 aa11.81□□□□□ -0.52
DDX41-215ENST00000512431 ARHGEF39Q8N4T4 335 aa11.81□□□□□ -0.52
DDX41-215ENST00000512431 OR13J1Q8NGT2 312 aa11.81□□□□□ -0.52
DDX41-215ENST00000512431 C18orf12Q96KH6 178 aa11.81□□□□□ -0.52
DDX41-215ENST00000512431 GBP4Q96PP9 640 aa11.81□□□□□ -0.52
DDX41-215ENST00000512431 EBNA1BP2Q99848 306 aaKnown RBP11.81□□□□□ -0.52
DDX41-215ENST00000512431 SPTLC3Q9NUV7 552 aa11.81□□□□□ -0.52
DDX41-215ENST00000512431 ZNF358Q9NW07 568 aa11.81□□□□□ -0.52
DDX41-215ENST00000512431 INTUQ9ULD6 942 aa11.81□□□□□ -0.52
DDX41-215ENST00000512431 EFR3BQ9Y2G0 817 aa11.81□□□□□ -0.52
DDX41-215ENST00000512431 ZNF839A8K0R7 811 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 FCHO1O14526 889 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 PDE9AO76083 593 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 MBD3O95983 291 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 HSD17B2P37059 387 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 CETN2P41208 172 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 TTPAP49638 278 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 HLCSP50747 726 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 ITGA8P53708 1063 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 NUP107P57740 925 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 OR4D2P58180 307 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 SLC26A5P58743 744 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 USP10Q14694 798 aaKnown RBP11.8□□□□□ -0.52
DDX41-215ENST00000512431 ABRAXAS2Q15018 415 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 IQCB1Q15051 598 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 TSTD2Q5T7W7 516 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 MEI1Q5TIA1 1274 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 ZNF468Q5VIY5 522 aaPredicted RBP11.8□□□□□ -0.52
DDX41-215ENST00000512431 ICE2Q659A1 982 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 ARSKQ6UWY0 536 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 CLEC9AQ6UXN8 241 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 SULF2Q8IWU5 870 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 OR9A1PQ8NGU1 263 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 C16orf52Q8NHV5 167 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 MBD6Q96DN6 1003 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 FAM118BQ9BPY3 351 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 GPATCH1Q9BRR8 931 aaKnown RBP11.8□□□□□ -0.52
DDX41-215ENST00000512431 HCN3Q9P1Z3 774 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 TAC3Q9UHF0 121 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 RUVBL2Q9Y230 463 aaKnown RBP11.8□□□□□ -0.52
DDX41-215ENST00000512431 L3MBTL1Q9Y468 752 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 HCFC1P51610 2035 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 GTF3C1Q12789 2109 aa11.8□□□□□ -0.52
DDX41-215ENST00000512431 IGKV1-8A0A0C4DH67 115 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 OR2W5A6NFC9 320 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 FAM171A2A8MVW0 826 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 P2RX6O15547 441 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 PEX1O43933 1283 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 TJP3O95049 919 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 METTL18O95568 372 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 TPM3P06753 285 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 IL10P22301 178 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 PEX19P40855 299 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 RFC3P40938 356 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 BCL6P41182 706 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 KIR2DL3P43628 341 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 ZFP36L2P47974 494 aaKnown RBP11.79□□□□□ -0.52
DDX41-215ENST00000512431 MARCKSL1P49006 195 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 ABATP80404 500 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 CDH17Q12864 832 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 ARHGAP19Q14CB8 494 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 CMPK2Q5EBM0 449 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 ZNF425Q6IV72 752 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 PCGF5Q86SE9 256 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 RPRMLQ8N4K4 120 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 PLPP5Q8NEB5 264 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 OR52K1Q8NGK4 314 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 NUDT8Q8WV74 236 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 PWWP2AQ96N64 755 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 SMR3AQ99954 134 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 OSBPL8Q9BZF1 889 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 GOLPH3Q9H4A6 298 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 TRIM45Q9H8W5 580 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms