RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 PACSIN2Q9UNF0 486 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 SNX6Q9UNH7 406 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 TNNQ9UQP3 1299 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 RBMX2Q9Y388 322 aaKnown RBP4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 AP4S1Q9Y587 144 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 RGPD5Q99666 1765 aa4.52□□□□□ -1.69
HMGB3P13-201ENST00000511263 THSD7AQ9UPZ6 1657 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 CLUHO75153 1309 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 ADGRA3Q8IWK6 1321 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 NRCAMQ92823 1304 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 SCN11AQ9UI33 1791 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 TRBV5-3A0A0A0MS03 114 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 IGLV5-39A0A0G2JS06 123 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 FAM90A10PA6NDY2 464 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 GAGE12JA6NER3 117 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 HMX3A6NHT5 357 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 MEI4A8MW99 385 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 H0YIV9 168 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 ANGPT2O15123 496 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 SLC22A2O15244 555 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 IRAK2O43187 625 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 BUB1O43683 1085 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 GMDSO60547 372 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 TSPAN3O60637 253 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 SPAG7O75391 227 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 CSDE1O75534 798 aaKnown RBP4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 CDC123O75794 336 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 RBBP9O75884 186 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 MYO1DO94832 1006 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 CDK14O94921 469 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 DEXIO95424 95 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 TGM6O95932 706 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 AGTP01019 485 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 OPN1LWP04000 364 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 MMP10P09238 476 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 SRCP12931 536 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 CHMP24386 653 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 GJB2P29033 226 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 PDHA2P29803 388 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 NMT1P30419 496 aaKnown RBP4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 CTNNB1P35222 781 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 SLCO1A2P46721 670 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 ENTPD1P49961 510 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 TKTL1P51854 596 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 NKX2-5P52952 324 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 FOXL2P58012 376 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 TIMM10P62072 90 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 FKBP1AP62942 108 aaKnown RBP4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 TNNC1P63316 161 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 DPYSL2Q16555 572 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 TRMT5Q32P41 509 aaKnown RBP4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 MAJINQ3KP22 176 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 NADK2Q4G0N4 442 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 KLHL12Q53G59 568 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 HSP90AA4PQ58FG1 418 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 DCAF6Q58WW2 860 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 SAPCD1Q5SSQ6 148 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 MPP7Q5T2T1 576 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 ELP2Q6IA86 826 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 PYHIN1Q6K0P9 492 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 CASC4Q6P4E1 433 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 PAPD4Q6PIY7 484 aaKnown RBP4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 BLOC1S2Q6QNY1 142 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 C4orf50Q6ZRC1 276 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 RGS9BPQ6ZS82 235 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 TPGS1Q6ZTW0 290 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZNF767PQ75MW2 155 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 LHFPL3Q86UP9 236 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 ZNF410Q86VK4 478 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 DDIASQ8IXT1 998 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 ARL14Q8N4G2 192 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 MARVELD2Q8N4S9 558 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 PTGR2Q8N8N7 351 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 ANKFN1Q8N957 763 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 SLC24A4Q8NFF2 622 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 OR1N1Q8NGS0 311 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 RNASE11Q8TAA1 199 aaKnown RBP4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 RAB3IL1Q8TBN0 382 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 TBC1D16Q8TBP0 767 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 RNF139Q8WU17 664 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 SLC13A3Q8WWT9 602 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 S100ZQ8WXG8 99 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 WASF1Q92558 559 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 LPGAT1Q92604 370 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 LPAR1Q92633 364 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 MCUR1Q96AQ8 359 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 MAGED4Q96JG8 741 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 ADAD1Q96M93 576 aaKnown RBP4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 QKIQ96PU8 341 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 ADPGKQ9BRR6 497 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 PIMREGQ9BSJ6 248 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 PI4K2AQ9BTU6 479 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 TBCDQ9BTW9 1192 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 MAGEE1Q9HCI5 957 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 TM9SF3Q9HD45 589 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 SEMA4BQ9NPR2 832 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 THSD1Q9NS62 852 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 OLA1Q9NTK5 396 aaKnown RBP4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 RNF146Q9NTX7 359 aa4.51□□□□□ -1.69
HMGB3P13-201ENST00000511263 ANKEF1Q9NU02 776 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms