RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 SCRG1O75711 98 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 OR2B3O76000 313 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 TIAF1O95411 115 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 DLGAP3O95886 979 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 C1GALT1C1LP0DN25 315 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 MYL2P10916 166 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 CXCR2P25025 360 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 GSTM2P28161 218 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 CASP2P42575 452 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 EMP3P54852 163 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 NAA20P61599 178 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 GTF2H2Q13888 395 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 MAP7Q14244 749 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 FRMPD2BQ6IN97 320 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 GTF2H2CQ6P1K8 395 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 TLDC1Q6P9B6 456 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 GOLGA7Q7Z5G4 137 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 SPACA3Q8IXA5 215 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 GPR135Q8IZ08 494 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 TBC1D19Q8N5T2 526 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 TCP10LQ8TDR4 215 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 ZNF483Q8TF39 744 aaPredicted RBP14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 SLC39A7Q92504 469 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 PTCD3Q96EY7 689 aaKnown RBP14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 LRFN5Q96NI6 719 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 TMEM237Q96Q45 408 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 AIF1LQ9BQI0 150 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 ULBP3Q9BZM4 244 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 CENPHQ9H3R5 247 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 SYNPO2LQ9H987 977 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 TMBIM4Q9HC24 238 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 GEMIN8Q9NWZ8 242 aaKnown RBP14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 SRPK3Q9UPE1 567 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 PCDHGA4Q9Y5G9 962 aa14.28□□□□□ -0.12
CDC42SE1-203ENST00000470278 UBR5O95071 2799 aaPredicted RBP14.27□□□□□ -0.12
CDC42SE1-203ENST00000470278 STMND1H3BQB6 276 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 TXNDC9O14530 226 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 TM9SF1O15321 606 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 PRPF4O43172 522 aaKnown RBP eCLIP14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 PRAMEF4O60810 478 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 CPNE3O75131 537 aaKnown RBP14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 WFS1O76024 890 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 STK17BO94768 372 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 CREB1P16220 341 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 IMPDH1P20839 514 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 AHRP35869 848 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 BCL6P41182 706 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 PCBP4P57723 403 aaKnown RBP14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 DNAJB13P59910 316 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 XKR6Q5GH73 641 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 PAGE2BQ5JRK9 111 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 ZNF678Q5SXM1 525 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 YOD1Q5VVQ6 348 aaPredicted RBP14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 PRAMEF9Q5VWM5 478 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 VN1R4Q7Z5H5 301 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 DTX1Q86Y01 620 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 TMEM126BQ8IUX1 230 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 ZNF843Q8N446 348 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 TEX9Q8N6V9 391 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 MFSD9Q8NBP5 474 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 RERGQ96A58 199 aaPredicted RBP14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 TLCD1Q96CP7 247 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 SPNS1Q9H2V7 528 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 NT5DC2Q9H857 520 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 ANGPTL3Q9Y5C1 460 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 FLNCQ14315 2725 aa14.27□□□□□ -0.13
CDC42SE1-203ENST00000470278 BSNQ9UPA5 3926 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 LOC105369274A0A096LPK9 316 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 LOC102723532A0A0G2JNH3 316 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 LRRC14BA6NHZ5 514 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 H0YGG7 62 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 SPAG7O75391 227 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 CTSBP07858 339 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 HBQ1P09105 142 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 LIPCP11150 499 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 CPA3P15088 417 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 CD22P20273 847 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 VARSP26640 1264 aaKnown RBP14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 ETV4P43268 484 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 SCTRP47872 440 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 VSX2P58304 361 aaPredicted RBP14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 ARF3P61204 181 aaPredicted RBP14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 IRF8Q02556 426 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 CHIT1Q13231 466 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 LAPTM5Q13571 262 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 DOC2AQ14183 400 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 SLBPQ14493 270 aaKnown RBP eCLIP14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 GRM7Q14831 915 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 PCLAFQ15004 111 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 PRTGQ2VWP7 1150 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 AGBL2Q5U5Z8 902 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 GRHL2Q6ISB3 625 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 PLD3Q8IV08 490 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 OR4N4Q8N0Y3 316 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 KRT78Q8N1N4 520 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 ARHGEF39Q8N4T4 335 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 CSNK1A1LQ8N752 337 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 CCDC63Q8NA47 563 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 ARMC2Q8NEN0 867 aa14.26□□□□□ -0.13
CDC42SE1-203ENST00000470278 TTLQ8NG68 377 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms