RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 NXNL2Q5VZ03 156 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 CCDC80Q76M96 950 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 SYNPOQ8N3V7 929 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 AMER2Q8N7J2 671 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 IL17RDQ8NFM7 739 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 UTP15Q8TED0 518 aaKnown RBP11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 TP53INP1Q96A56 240 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 SPATA17Q96L03 361 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 OR5M11Q96RB7 305 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 TPT1P8Q9HAU6 139 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 RDH14Q9HBH5 336 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 EHD3Q9NZN3 535 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 FZD4Q9ULV1 537 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 LYVE1Q9Y5Y7 322 aa11.34□□□□□ -0.59
PDZRN3-203ENST00000462146 C2orf78A6NCI8 922 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 SYN3O14994 580 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 MRPS14O60783 128 aaKnown RBP11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 TBL1XO60907 577 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 IGHA2P01877 340 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 HSPA14Q0VDF9 509 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 GPR17Q13304 367 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 GAB1Q13480 694 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 ZNF648Q5T619 568 aaPredicted RBP11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 TUBA3EQ6PEY2 450 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 PGBD3Q8N328 593 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 GPR26Q8NDV2 337 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 OR9Q2Q8NGE9 314 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 SPPL2AQ8TCT8 520 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 FCGR1BQ92637 280 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 MTERF1Q99551 399 aaKnown RBP11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 RRAGCQ9HB90 399 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 FKBP14Q9NWM8 211 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 MARCH5Q9NX47 278 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 SPASTQ9UBP0 616 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 GABRQQ9UN88 632 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 LAMA2P24043 3122 aaKnown RBP11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 TRBV5-4A0A0C4DH59 114 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 J3KTA2 159 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 CYP7B1O75881 506 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 CD22P20273 847 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 AOAHP28039 575 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 CSKP41240 450 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 RGS6P49758 472 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 UGT2B15P54855 530 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 B4GALNT1Q00973 533 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 PRKCDQ05655 676 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 ST3GAL4Q11206 333 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 KCNA10Q16322 511 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 MACC1Q6ZN28 852 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 VASH1Q7L8A9 365 aaPredicted RBP11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 MMAAQ8IVH4 418 aaKnown RBP11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 NEDD4LQ96PU5 975 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 EPYCQ99645 322 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 CCM2Q9BSQ5 444 aa11.33□□□□□ -0.6
PDZRN3-203ENST00000462146 PRAMEF25A6NGN4 478 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 TNFRSF11BO00300 401 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 KIAA0513O60268 411 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 TRBC1P01850 177 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 ABCB1P08183 1280 aaPredicted RBP11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 HLA-EP13747 358 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 LIMK1P53667 647 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 ZNF45Q02386 682 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 PPIGQ13427 754 aaKnown RBP eCLIP11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 IRF3Q14653 427 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 TAF1CQ15572 869 aaPredicted RBP11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 CDKN3Q16667 212 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 THOC7Q6I9Y2 204 aaKnown RBP11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 GATAD2AQ86YP4 633 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 CACTIN-AS1Q8N1I8 211 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 NXPE1Q8N323 547 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 STX19Q8N4C7 294 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 MYDGFQ969H8 173 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 CHST8Q9H2A9 424 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 NMRK2Q9NPI5 230 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 FAM8A1Q9UBU6 413 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 RAPGEFL1Q9UHV5 662 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 PCDHGA2Q9Y5H1 932 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 ZNF840PA6NDX5 716 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 OR6C75A6NL08 312 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 H3BQ06 376 aaPredicted RBP11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 SUV39H1O43463 412 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 PCDH7O60245 1069 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 HOXB6P17509 224 aaKnown RBP11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 CDH12P55289 794 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 TRIM71Q2Q1W2 868 aaKnown RBP11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 BCL7AQ4VC05 210 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 ZMAT1Q5H9K5 638 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 LRRC73Q5JTD7 316 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 ADGRF1Q5T601 910 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 FRG2Q64ET8 278 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 ZNF852Q6ZMS4 543 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 CHST9Q7L1S5 443 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 APCDD1Q8J025 514 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 NAGSQ8N159 534 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 OR10G2Q8NGC3 310 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 FRG2BQ96QU4 278 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 P2RY13Q9BPV8 354 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 HTATIP2Q9BUP3 242 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 NDEL1Q9GZM8 345 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 NUAK2Q9H093 628 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms