RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 GOLGA8KD6RF30 607 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 E5RI56 91 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 E9PLN8 166 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 H0YIG0 161 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 GOLGA8TH3BQL2 631 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 H7BY64 318 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 SMAPO00193 183 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 PFDN6O15212 129 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 MAN1A2O60476 641 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 IL1RNP18510 177 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 NMBRP28336 390 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 HSD17B2P37059 387 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 AGTR2P50052 363 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 ART1P52961 327 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 TAS2R50P59544 299 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 KLF1Q13351 362 aaPredicted RBP16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 ARHGAP19Q14CB8 494 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 ACSBG2Q5FVE4 666 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 MEI1Q5TIA1 1274 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 PAPD4Q6PIY7 484 aaKnown RBP16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 CEP128Q6ZU80 1094 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 PRSS41Q7RTY9 318 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 SHISA5Q8N114 240 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 PRAP1Q96NZ9 151 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 EBNA1BP2Q99848 306 aaKnown RBP16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 MACROD1Q9BQ69 325 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 VKORC1Q9BQB6 163 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 CRYL1Q9Y2S2 319 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 PCNX1Q96RV3 2341 aa16.99■□□□□ 0.31
CHCHD3-203ENST00000448878 CCDC168Q8NDH2 2452 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 SGK494L7N484 410 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 NDC80O14777 642 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 CDC123O75794 336 aaPredicted RBP16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 FTCDO95954 541 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 ERGP11308 486 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 ZNF24P17028 368 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 SNRPNP63162 240 aaKnown RBP16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 ABATP80404 500 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 SNX1Q13596 522 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 PTK6Q13882 451 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 NSDHLQ15738 373 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 KRTAP21-3Q3LHN1 58 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 SFT2D3Q587I9 215 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 MRNIPQ6NTE8 343 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 MPP5Q8N3R9 675 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 ARHGEF39Q8N4T4 335 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 CCDC89Q8N998 374 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 LRRC57Q8N9N7 239 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 ZCCHC10Q8TBK6 192 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 PHF10Q8WUB8 498 aaKnown RBP16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 LPAR4Q99677 370 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 NPAS2Q99743 824 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 TRIM51Q9BSJ1 452 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 RBCK1Q9BYM8 510 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 GALPQ9UBC7 116 aa16.98■□□□□ 0.31
CHCHD3-203ENST00000448878 MIF4GDA9UHW6 222 aaKnown RBP16.97■□□□□ 0.31
CHCHD3-203ENST00000448878 H3BMM5 538 aa16.97■□□□□ 0.31
CHCHD3-203ENST00000448878 MYO1CO00159 1063 aa16.97■□□□□ 0.31
CHCHD3-203ENST00000448878 PSIP1O75475 530 aaKnown RBP16.97■□□□□ 0.31
CHCHD3-203ENST00000448878 VAPBO95292 243 aa16.97■□□□□ 0.31
CHCHD3-203ENST00000448878 NSA2O95478 260 aaKnown RBP16.97■□□□□ 0.31
CHCHD3-203ENST00000448878 SLC16A8O95907 504 aa16.97■□□□□ 0.31
CHCHD3-203ENST00000448878 TPOP07202 933 aa16.97■□□□□ 0.31
CHCHD3-203ENST00000448878 CES3Q6UWW8 571 aa16.97■□□□□ 0.31
CHCHD3-203ENST00000448878 KIAA1328Q86T90 577 aa16.97■□□□□ 0.31
CHCHD3-203ENST00000448878 TMEM200AQ86VY9 491 aa16.97■□□□□ 0.31
CHCHD3-203ENST00000448878 SIAH3Q8IW03 269 aa16.97■□□□□ 0.31
CHCHD3-203ENST00000448878 CPSF7Q8N684 471 aaKnown RBP16.97■□□□□ 0.31
CHCHD3-203ENST00000448878 ZNF480Q8WV37 535 aa16.97■□□□□ 0.31
CHCHD3-203ENST00000448878 POM121Q96HA1 1249 aa16.97■□□□□ 0.31
CHCHD3-203ENST00000448878 BIRC8Q96P09 236 aa16.97■□□□□ 0.31
CHCHD3-203ENST00000448878 TRIM5Q9C035 493 aa16.97■□□□□ 0.31
CHCHD3-203ENST00000448878 LACRTQ9GZZ8 138 aa16.97■□□□□ 0.31
CHCHD3-203ENST00000448878 ANKHQ9HCJ1 492 aa16.97■□□□□ 0.31
CHCHD3-203ENST00000448878 MMP25Q9NPA2 562 aa16.97■□□□□ 0.31
CHCHD3-203ENST00000448878 SCN2AQ99250 2005 aa16.97■□□□□ 0.31
CHCHD3-203ENST00000448878 E7ENX8 843 aa16.96■□□□□ 0.31
CHCHD3-203ENST00000448878 LIASO43766 372 aa16.96■□□□□ 0.31
CHCHD3-203ENST00000448878 CDC40O60508 579 aaKnown RBP eCLIP16.96■□□□□ 0.31
CHCHD3-203ENST00000448878 SLC25A12O75746 678 aa16.96■□□□□ 0.31
CHCHD3-203ENST00000448878 NEURL1O76050 574 aa16.96■□□□□ 0.31
CHCHD3-203ENST00000448878 CYC1P08574 325 aa16.96■□□□□ 0.31
CHCHD3-203ENST00000448878 ATP5DP30049 168 aa16.96■□□□□ 0.31
CHCHD3-203ENST00000448878 BCL6P41182 706 aa16.96■□□□□ 0.31
CHCHD3-203ENST00000448878 OR4D2P58180 307 aa16.96■□□□□ 0.31
CHCHD3-203ENST00000448878 TAP2Q03519 686 aa16.96■□□□□ 0.31
CHCHD3-203ENST00000448878 KCNJ11Q14654 390 aa16.96■□□□□ 0.31
CHCHD3-203ENST00000448878 ABRAXAS2Q15018 415 aa16.96■□□□□ 0.31
CHCHD3-203ENST00000448878 SYCE1Q8N0S2 351 aa16.96■□□□□ 0.31
CHCHD3-203ENST00000448878 C1orf54Q8WWF1 131 aa16.96■□□□□ 0.31
CHCHD3-203ENST00000448878 PEX11GQ96HA9 241 aa16.96■□□□□ 0.31
CHCHD3-203ENST00000448878 DMRTA2Q96SC8 542 aa16.96■□□□□ 0.31
CHCHD3-203ENST00000448878 TSPY26PQ9H489 355 aa16.96■□□□□ 0.31
CHCHD3-203ENST00000448878 TREX1Q9NSU2 369 aa16.96■□□□□ 0.31
CHCHD3-203ENST00000448878 BFARQ9NZS9 450 aa16.96■□□□□ 0.31
CHCHD3-203ENST00000448878 PAK5Q9P286 719 aa16.96■□□□□ 0.31
CHCHD3-203ENST00000448878 FAM90A27PA6NNH2 459 aa16.95■□□□□ 0.3
CHCHD3-203ENST00000448878 BTNL10A8MVZ5 291 aa16.95■□□□□ 0.3
CHCHD3-203ENST00000448878 RDH16O75452 317 aa16.95■□□□□ 0.3
CHCHD3-203ENST00000448878 ESR1P03372 595 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms