RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 IDSP22304 550 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 KELP23276 732 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 EEF1B2P24534 225 aaKnown RBP10.05□□□□□ -0.8
CPNE1-218ENST00000439806 RPL10P27635 214 aaKnown RBP10.05□□□□□ -0.8
CPNE1-218ENST00000439806 DCTP40126 519 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 IL12RB1P42701 662 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 ARHGDIAP52565 204 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 IST1P53990 364 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 ERVK-21P61565 698 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 ZNF763Q0D2J5 394 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 CNTN1Q12860 1018 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 TOP3AQ13472 1001 aaPredicted RBP10.05□□□□□ -0.8
CPNE1-218ENST00000439806 CAMK2GQ13555 558 aaPredicted RBP10.05□□□□□ -0.8
CPNE1-218ENST00000439806 SPIDRQ14159 915 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 E2F2Q14209 437 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 CYP2A13Q16696 494 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 ZBED5Q49AG3 693 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 TMEM259Q4ZIN3 620 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 RBM48Q5RL73 367 aaKnown RBP10.05□□□□□ -0.8
CPNE1-218ENST00000439806 ADNP2Q6IQ32 1131 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 NXPE4Q6UWF7 544 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 LCTLQ6UWM7 567 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 CAMKMTQ7Z624 323 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 THAP5Q7Z6K1 395 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 HORMAD1Q86X24 394 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 CLVS1Q8IUQ0 354 aaPredicted RBP10.05□□□□□ -0.8
CPNE1-218ENST00000439806 LAS2Q8IYD9 372 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 KRT78Q8N1N4 520 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 PGBD3Q8N328 593 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 ST13P5Q8NFI4 369 aaPredicted RBP10.05□□□□□ -0.8
CPNE1-218ENST00000439806 PJA1Q8NG27 643 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 PNPT1Q8TCS8 783 aaKnown RBP10.05□□□□□ -0.8
CPNE1-218ENST00000439806 RAD51AP1Q96B01 352 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 ERLEC1Q96DZ1 483 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 SH3GL3Q99963 347 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 NPLQ9BXD5 320 aaPredicted RBP10.05□□□□□ -0.8
CPNE1-218ENST00000439806 HDAC8Q9BY41 377 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 EHD1Q9H4M9 534 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 REEP4Q9H6H4 257 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 TPT1P8Q9HAU6 139 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 TM9SF3Q9HD45 589 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 PRSS16Q9NQE7 514 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 ATAD3AQ9NVI7 634 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 DZANK1Q9NVP4 752 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 FAM118AQ9NWS6 357 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 THAP10Q9P2Z0 257 aaPredicted RBP10.05□□□□□ -0.8
CPNE1-218ENST00000439806 ZNF282Q9UDV7 671 aaPredicted RBP10.05□□□□□ -0.8
CPNE1-218ENST00000439806 ATP6V1HQ9UI12 483 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 C3orf18Q9UK00 162 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 SH2B3Q9UQQ2 575 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 ASF1AQ9Y294 204 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 TMEM98Q9Y2Y6 226 aa10.05□□□□□ -0.8
CPNE1-218ENST00000439806 MAGED1Q9Y5V3 778 aaPredicted RBP10.05□□□□□ -0.8
CPNE1-218ENST00000439806 BPTFQ12830 3046 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 MYO1GB0I1T2 1018 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 SCN2BO60939 215 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 KCNK5O95279 499 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 FKBP9O95302 570 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 RPN2P04844 631 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 APODP05090 189 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 ABCB1P08183 1280 aaPredicted RBP10.04□□□□□ -0.8
CPNE1-218ENST00000439806 NPPBP16860 134 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 CDH2P19022 906 aaPredicted RBP10.04□□□□□ -0.8
CPNE1-218ENST00000439806 EN2P19622 333 aaPredicted RBP10.04□□□□□ -0.8
CPNE1-218ENST00000439806 ELK4P28324 431 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 ACADLP28330 430 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 KDELR2P33947 212 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 TTKP33981 857 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 OPRD1P41143 372 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 P2RY2P41231 377 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 HLCSP50747 726 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 PPP2R2BQ00005 443 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 C2orf80Q0P641 193 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 RPA4Q13156 261 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 RUNX3Q13761 415 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 BROXQ5VW32 411 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 OR2T5Q6IEZ7 315 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 ANGPTL8Q6UXH0 198 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 ADAMTSL4Q6UY14 1074 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 NUDT18Q6ZVK8 323 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 EIF3MQ7L2H7 374 aaKnown RBP10.04□□□□□ -0.8
CPNE1-218ENST00000439806 ZNF551Q7Z340 670 aaPredicted RBP10.04□□□□□ -0.8
CPNE1-218ENST00000439806 PDZD3Q86UT5 571 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 LRRTM4Q86VH4 590 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 AMZ2Q86W34 360 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 DCUN1D3Q8IWE4 304 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 SFTPA1Q8IWL2 248 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 HS3ST5Q8IZT8 346 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 SYNPOQ8N3V7 929 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 ARL10Q8N8L6 244 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 OR2T29Q8NH02 315 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 ADAMTS16Q8TE57 1224 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 PPCDCQ96CD2 204 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 COQ8BQ96D53 544 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 MUS81Q96NY9 551 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 PHF12Q96QT6 1004 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 MBOAT4Q96T53 435 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 ZDHHC5Q9C0B5 715 aa10.04□□□□□ -0.8
CPNE1-218ENST00000439806 BHLHE41Q9C0J9 482 aaPredicted RBP10.04□□□□□ -0.8
CPNE1-218ENST00000439806 GABARAPL1Q9H0R8 117 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms