RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 CPNE3O75131 537 aaKnown RBP13.74□□□□□ -0.21
CSTF3-202ENST00000431742 KATNA1O75449 491 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 KIAA0754O94854 1291 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 RORAP35398 523 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 AHRP35869 848 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 ETV4P43268 484 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 EMP3P54852 163 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 PCBP4P57723 403 aaKnown RBP13.74□□□□□ -0.21
CSTF3-202ENST00000431742 TRAF3Q13114 568 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 CHIT1Q13231 466 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 DOC2AQ14183 400 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 SLBPQ14493 270 aaKnown RBP eCLIP13.74□□□□□ -0.21
CSTF3-202ENST00000431742 UNC50Q53HI1 259 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 XKR6Q5GH73 641 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 WASHC2DQ5SRD0 308 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 ZNF678Q5SXM1 525 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 YOD1Q5VVQ6 348 aaPredicted RBP13.74□□□□□ -0.21
CSTF3-202ENST00000431742 TIPARPQ7Z3E1 657 aaKnown RBP13.74□□□□□ -0.21
CSTF3-202ENST00000431742 ZFAND4Q86XD8 727 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 ANKRD53Q8N9V6 530 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 SLC38A9Q8NBW4 561 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 ARMC2Q8NEN0 867 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 PTCD3Q96EY7 689 aaKnown RBP13.74□□□□□ -0.21
CSTF3-202ENST00000431742 LRFN5Q96NI6 719 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 NSUN5Q96P11 429 aaKnown RBP13.74□□□□□ -0.21
CSTF3-202ENST00000431742 FAM111AQ96PZ2 611 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 EFCAB11Q9BUY7 163 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 NT5DC2Q9H857 520 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 ACTR5Q9H9F9 607 aaPredicted RBP13.74□□□□□ -0.21
CSTF3-202ENST00000431742 OXSMQ9NWU1 459 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 MID2Q9UJV3 735 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 SRPK3Q9UPE1 567 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 SCN3AQ9NY46 2000 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 NUP210LQ5VU65 1888 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 USP24Q9UPU5 2620 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 GOLGA6L10A6NI86 522 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 PRPF4O43172 522 aaKnown RBP eCLIP13.73□□□□□ -0.21
CSTF3-202ENST00000431742 OR1F1O43749 312 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 UGDHO60701 494 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 SASH3O75995 380 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 MED26O95402 600 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 LIPCP11150 499 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 CPA3P15088 417 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 IMPDH1P20839 514 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 CXCR2P25025 360 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 DNAJB13P59910 316 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 IRF8Q02556 426 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 LAPTM5Q13571 262 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 GRM7Q14831 915 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 HKDC1Q2TB90 917 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 AGBL2Q5U5Z8 902 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 ZNF385CQ66K41 422 aaPredicted RBP13.73□□□□□ -0.21
CSTF3-202ENST00000431742 GRHL2Q6ISB3 625 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 RHBDD2Q6NTF9 364 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 TMIGD1Q6UXZ0 262 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 ZNF517Q6ZMY9 492 aaPredicted RBP13.73□□□□□ -0.21
CSTF3-202ENST00000431742 TBC1D19Q8N5T2 526 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 ZNF655Q8N720 491 aaPredicted RBP13.73□□□□□ -0.21
CSTF3-202ENST00000431742 CSNK1A1LQ8N752 337 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 KDF1Q8NAX2 398 aaPredicted RBP13.73□□□□□ -0.21
CSTF3-202ENST00000431742 OR52B6Q8NGF0 335 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 RERGQ96A58 199 aaPredicted RBP13.73□□□□□ -0.21
CSTF3-202ENST00000431742 RNF31Q96EP0 1072 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 SEC16BQ96JE7 1060 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 C10orf90Q96M02 699 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 SH3GL2Q99962 352 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 IPPKQ9H8X2 491 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 STARD5Q9NSY2 213 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 ZFP69BQ9UJL9 534 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 RUVBL1Q9Y265 456 aaKnown RBP13.73□□□□□ -0.21
CSTF3-202ENST00000431742 ANGPTL3Q9Y5C1 460 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 CELSR3Q9NYQ7 3312 aa13.73□□□□□ -0.21
CSTF3-202ENST00000431742 TEX51A0A1B0GUA7 166 aa13.72□□□□□ -0.21
CSTF3-202ENST00000431742 TXNDC9O14530 226 aa13.72□□□□□ -0.21
CSTF3-202ENST00000431742 H2AFYO75367 372 aaKnown RBP13.72□□□□□ -0.21
CSTF3-202ENST00000431742 NTRK1P04629 796 aa13.72□□□□□ -0.21
CSTF3-202ENST00000431742 HBQ1P09105 142 aa13.72□□□□□ -0.21
CSTF3-202ENST00000431742 GSTM2P28161 218 aa13.72□□□□□ -0.21
CSTF3-202ENST00000431742 GPS2Q13227 327 aa13.72□□□□□ -0.21
CSTF3-202ENST00000431742 MPP2Q14168 576 aa13.72□□□□□ -0.21
CSTF3-202ENST00000431742 PAGE2BQ5JRK9 111 aa13.72□□□□□ -0.21
CSTF3-202ENST00000431742 LIPJQ5W064 366 aa13.72□□□□□ -0.21
CSTF3-202ENST00000431742 RPS27LQ71UM5 84 aaKnown RBP13.72□□□□□ -0.21
CSTF3-202ENST00000431742 VN1R5Q7Z5H4 357 aa13.72□□□□□ -0.21
CSTF3-202ENST00000431742 ASPGQ86U10 573 aa13.72□□□□□ -0.21
CSTF3-202ENST00000431742 PROSER1Q86XN7 944 aa13.72□□□□□ -0.21
CSTF3-202ENST00000431742 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.72□□□□□ -0.21
CSTF3-202ENST00000431742 LAS2Q8IYD9 372 aa13.72□□□□□ -0.21
CSTF3-202ENST00000431742 DSELQ8IZU8 1212 aa13.72□□□□□ -0.21
CSTF3-202ENST00000431742 KRT78Q8N1N4 520 aa13.72□□□□□ -0.21
CSTF3-202ENST00000431742 L3MBTL4Q8NA19 623 aa13.72□□□□□ -0.21
CSTF3-202ENST00000431742 CCDC63Q8NA47 563 aa13.72□□□□□ -0.21
CSTF3-202ENST00000431742 TTC29Q8NA56 475 aaPredicted RBP13.72□□□□□ -0.21
CSTF3-202ENST00000431742 CAMKVQ8NCB2 501 aa13.72□□□□□ -0.21
CSTF3-202ENST00000431742 GALNT6Q8NCL4 622 aa13.72□□□□□ -0.21
CSTF3-202ENST00000431742 ZNF248Q8NDW4 579 aa13.72□□□□□ -0.21
CSTF3-202ENST00000431742 NT5CQ8TCD5 201 aa13.72□□□□□ -0.21
CSTF3-202ENST00000431742 CREB3L4Q8TEY5 395 aa13.72□□□□□ -0.21
CSTF3-202ENST00000431742 ZCCHC14Q8WYQ9 949 aaKnown RBP13.72□□□□□ -0.21
CSTF3-202ENST00000431742 ARL8AQ96BM9 186 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms