RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 CTGFP29279 349 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 PRDX2P32119 198 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 NF2P35240 595 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 CHI3L1P36222 383 aaPredicted RBP4.72□□□□□ -1.65
GABPB1-204ENST00000396464 HTR2BP41595 481 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 LEPRP48357 1165 aaKnown RBP4.72□□□□□ -1.65
GABPB1-204ENST00000396464 CEBPDP49716 269 aaPredicted RBP4.72□□□□□ -1.65
GABPB1-204ENST00000396464 ZNF84P51523 738 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 MAPK12P53778 367 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 XIAPP98170 497 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 DSC1Q08554 894 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 MAB21L1Q13394 359 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 XRCC4Q13426 336 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 COTL1Q14019 142 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 RBBP5Q15291 538 aaKnown RBP4.72□□□□□ -1.65
GABPB1-204ENST00000396464 CHRNA6Q15825 494 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 SSX2Q16385 188 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 KLHL40Q2TBA0 621 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 ESCO2Q56NI9 601 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 PLAC9Q5JTB6 97 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 C6orf10Q5SRN2 563 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 HECTD2Q5U5R9 776 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 TTC23Q5W5X9 447 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 ALS2CLQ60I27 953 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 TPRA1Q86W33 373 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 ANKRD46Q86W74 232 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 LONP2Q86WA8 852 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 MEX3DQ86XN8 651 aaKnown RBP4.72□□□□□ -1.65
GABPB1-204ENST00000396464 ZDHHC17Q8IUH5 632 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 SLC7A5P1Q8MH63 180 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 C12orf76Q8N812 135 aaPredicted RBP4.72□□□□□ -1.65
GABPB1-204ENST00000396464 BEST2Q8NFU1 509 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 OR1J2Q8NGS2 313 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 HM13Q8TCT9 377 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 PANX1Q96RD7 426 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 RAB40CQ96S21 281 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 NPAS2Q99743 824 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 C17orf62Q9BQA9 187 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 TRPV6Q9H1D0 765 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 NEK6Q9HC98 313 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 TUBG2Q9NRH3 451 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 MRPL17Q9NRX2 175 aaKnown RBP4.72□□□□□ -1.65
GABPB1-204ENST00000396464 COPS7AQ9UBW8 275 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 OR14J1Q9UGF5 321 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 FZD4Q9ULV1 537 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 FZD10Q9ULW2 581 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 BARX2Q9UMQ3 279 aaPredicted RBP4.72□□□□□ -1.65
GABPB1-204ENST00000396464 SLC9A8Q9Y2E8 581 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 IFT52Q9Y366 437 aa4.72□□□□□ -1.65
GABPB1-204ENST00000396464 GAKO14976 1311 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 KIF27Q86VH2 1401 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 FAM240BA0A1B0GVZ2 78 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 WASH3PC4AMC7 463 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 TSPAN1O60635 241 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 CDH16O75309 829 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 NIPSNAP2O75323 286 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 SERPINI2O75830 405 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 CHRNA1P02708 482 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 CAPN1P07384 714 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 NUDT17P0C025 328 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 AKR1A1P14550 325 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 PPP3CBP16298 524 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 HNF1AP20823 631 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 FBLP22087 321 aaKnown RBP4.71□□□□□ -1.66
GABPB1-204ENST00000396464 UBA1P22314 1058 aaKnown RBP4.71□□□□□ -1.66
GABPB1-204ENST00000396464 PROZP22891 400 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 DDX6P26196 483 aaKnown RBP eCLIP4.71□□□□□ -1.666e-6■■■■□ 19.3
GABPB1-204ENST00000396464 NMT1P30419 496 aaKnown RBP4.71□□□□□ -1.66
GABPB1-204ENST00000396464 CYP2C18P33260 490 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 GRIA1P42261 906 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 CDX1P47902 265 aaPredicted RBP4.71□□□□□ -1.66
GABPB1-204ENST00000396464 HNRNPMP52272 730 aaKnown RBP eCLIP4.71□□□□□ -1.66
GABPB1-204ENST00000396464 SSTP61278 116 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 SNRPEP62304 92 aaKnown RBP4.71□□□□□ -1.66
GABPB1-204ENST00000396464 PDE1BQ01064 536 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 SLC34A1Q06495 639 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 STIM1Q13586 685 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 NR1D2Q14995 579 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 MEP1AQ16819 746 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 PCK2Q16822 640 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 PLK5Q496M5 336 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 DCAF6Q58WW2 860 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 VWA5B1Q5TIE3 1220 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 PRAMEF5Q5TYX0 476 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 ATF7IP2Q5U623 682 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 FAM46CQ5VWP2 391 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 PRAMEF6Q5VXH4 476 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 NSUN5P2Q63ZY6 315 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 NAIF1Q69YI7 327 aaPredicted RBP4.71□□□□□ -1.66
GABPB1-204ENST00000396464 OR7E24Q6IFN5 339 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 FAM159AQ6UWV7 190 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 ZNF517Q6ZMY9 492 aaPredicted RBP4.71□□□□□ -1.66
GABPB1-204ENST00000396464 ZNF704Q6ZNC4 412 aaPredicted RBP4.71□□□□□ -1.66
GABPB1-204ENST00000396464 RHOUQ7L0Q8 258 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 BZW1Q7L1Q6 419 aaKnown RBP4.71□□□□□ -1.66
GABPB1-204ENST00000396464 LINGO2Q7L985 606 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 CCDC65Q8IXS2 484 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 DSELQ8IZU8 1212 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 LRRC75A-AS1Q8N1F1 130 aa4.71□□□□□ -1.66
GABPB1-204ENST00000396464 CRYBG2Q8N1P7 616 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms