RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 HELZ2Q9BYK8 2649 aaKnown RBP21.24■□□□□ 0.99
GTF2F1-204ENST00000594965 IGLV3-12A0A075B6K2 115 aa21.24■□□□□ 0.99
GTF2F1-204ENST00000594965 KCNE1BA0A087WTH5 132 aa21.24■□□□□ 0.99
GTF2F1-204ENST00000594965 NPEPPSL1A6NEC2 478 aa21.24■□□□□ 0.99
GTF2F1-204ENST00000594965 GSTA2P09210 222 aa21.24■□□□□ 0.99
GTF2F1-204ENST00000594965 CDH1P12830 882 aa21.24■□□□□ 0.99
GTF2F1-204ENST00000594965 MMP11P24347 488 aa21.24■□□□□ 0.99
GTF2F1-204ENST00000594965 CASRP41180 1078 aa21.24■□□□□ 0.99
GTF2F1-204ENST00000594965 GUCY2DQ02846 1103 aa21.24■□□□□ 0.99
GTF2F1-204ENST00000594965 KLRB1Q12918 225 aa21.24■□□□□ 0.99
GTF2F1-204ENST00000594965 WHAMMP3Q1A5X7 153 aa21.24■□□□□ 0.99
GTF2F1-204ENST00000594965 DCAF10Q5QP82 559 aa21.24■□□□□ 0.99
GTF2F1-204ENST00000594965 GARNL3Q5VVW2 1013 aa21.24■□□□□ 0.99
GTF2F1-204ENST00000594965 C8orf74Q6P047 294 aa21.24■□□□□ 0.99
GTF2F1-204ENST00000594965 CCDC25Q86WR0 208 aa21.24■□□□□ 0.99
GTF2F1-204ENST00000594965 CDKL2Q92772 493 aa21.24■□□□□ 0.99
GTF2F1-204ENST00000594965 RBBP8Q99708 897 aa21.24■□□□□ 0.99
GTF2F1-204ENST00000594965 CPNE1Q99829 537 aa21.24■□□□□ 0.99
GTF2F1-204ENST00000594965 TRIM54Q9BYV2 358 aa21.24■□□□□ 0.99
GTF2F1-204ENST00000594965 CAB39LQ9H9S4 337 aa21.24■□□□□ 0.99
GTF2F1-204ENST00000594965 POPDC3Q9HBV1 291 aa21.24■□□□□ 0.99
GTF2F1-204ENST00000594965 ZDHHC18Q9NUE0 388 aa21.24■□□□□ 0.99
GTF2F1-204ENST00000594965 FEZF1A0PJY2 475 aa21.23■□□□□ 0.99
GTF2F1-204ENST00000594965 A6NL46 340 aa21.23■□□□□ 0.99
GTF2F1-204ENST00000594965 SOCS6O14544 535 aa21.23■□□□□ 0.99
GTF2F1-204ENST00000594965 LCMT2O60294 686 aaKnown RBP21.23■□□□□ 0.99
GTF2F1-204ENST00000594965 RPS15AP62244 130 aaKnown RBP21.23■□□□□ 0.99
GTF2F1-204ENST00000594965 POU4F1Q01851 419 aa21.23■□□□□ 0.99
GTF2F1-204ENST00000594965 TLE1Q04724 770 aa21.23■□□□□ 0.99
GTF2F1-204ENST00000594965 AMER3Q8N944 861 aa21.23■□□□□ 0.99
GTF2F1-204ENST00000594965 STT3BQ8TCJ2 826 aa21.23■□□□□ 0.99
GTF2F1-204ENST00000594965 TM4SF19Q96DZ7 209 aa21.23■□□□□ 0.99
GTF2F1-204ENST00000594965 MVB12AQ96EY5 273 aa21.23■□□□□ 0.99
GTF2F1-204ENST00000594965 FER1L6-AS2Q96M78 137 aa21.23■□□□□ 0.99
GTF2F1-204ENST00000594965 GPR22Q99680 433 aa21.23■□□□□ 0.99
GTF2F1-204ENST00000594965 GPAMQ9HCL2 828 aa21.23■□□□□ 0.99
GTF2F1-204ENST00000594965 NXT1Q9UKK6 140 aaKnown RBP21.23■□□□□ 0.99
GTF2F1-204ENST00000594965 HS3ST3B1Q9Y662 390 aa21.23■□□□□ 0.99
GTF2F1-204ENST00000594965 SPTA1P02549 2419 aa21.23■□□□□ 0.99
GTF2F1-204ENST00000594965 AGPSO00116 658 aa21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 PEX12O00623 359 aa21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 TXNDC9O14530 226 aa21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 FFAR3O14843 346 aa21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 GPR42O15529 346 aa21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 ZGLP1P0C6A0 271 aa21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 FBLP22087 321 aaKnown RBP21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 SLC26A3P40879 764 aa21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 BCL6P41182 706 aa21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 PGDP52209 483 aa21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 KLC1Q07866 573 aa21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 KBTBD12Q3ZCT8 623 aa21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 VWA2Q5GFL6 755 aa21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 ABHD11Q8NFV4 315 aa21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 OR4K1Q8NGD4 311 aa21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 ATL1Q8WXF7 558 aa21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 NACC2Q96BF6 587 aa21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 THAP11Q96EK4 314 aa21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 MACROD1Q9BQ69 325 aa21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 MESP1Q9BRJ9 268 aa21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 HAUS8Q9BT25 410 aa21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 ZNF282Q9UDV7 671 aaPredicted RBP21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 CDC14AQ9UNH5 594 aa21.22■□□□□ 0.99
GTF2F1-204ENST00000594965 SPENQ96T58 3664 aaKnown RBP21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 A0A0A6YYC8 382 aaPredicted RBP21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 I3L1I5 382 aaPredicted RBP21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 PHGDHO43175 533 aaKnown RBP21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 FAM155BO75949 473 aa21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 GP5P40197 560 aa21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 ILF2Q12905 390 aaKnown RBP21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 RAPSNQ13702 412 aa21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 DSG2Q14126 1118 aa21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 FAM53BQ14153 422 aa21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 TSNQ15631 228 aaKnown RBP21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 KIRREL2Q6UWL6 708 aa21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 LAPTM4BQ86VI4 370 aa21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 SHISA5Q8N114 240 aa21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 MMGT1Q8N4V1 131 aa21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 TEX19Q8NA77 164 aa21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 ZNF592Q92610 1267 aa21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 MIEF2Q96C03 454 aa21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 MMABQ96EY8 250 aaPredicted RBP21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 SARGQ9BW04 601 aa21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 UNKQ9C0B0 810 aaKnown RBP21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 DRC3Q9H069 523 aa21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 SEMA3GQ9NS98 782 aa21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 OARD1Q9Y530 152 aa21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 PCDHGB7Q9Y5F8 929 aa21.21■□□□□ 0.99
GTF2F1-204ENST00000594965 PABPN1LA6NDY0 278 aaKnown RBP21.2■□□□□ 0.98
GTF2F1-204ENST00000594965 ALOX12BO75342 701 aa21.2■□□□□ 0.98
GTF2F1-204ENST00000594965 IGHEP01854 428 aa21.2■□□□□ 0.98
GTF2F1-204ENST00000594965 SOX8P57073 446 aa21.2■□□□□ 0.98
GTF2F1-204ENST00000594965 CDKL1Q00532 357 aa21.2■□□□□ 0.98
GTF2F1-204ENST00000594965 MEF2AQ02078 507 aaPredicted RBP21.2■□□□□ 0.98
GTF2F1-204ENST00000594965 OCA2Q04671 838 aa21.2■□□□□ 0.98
GTF2F1-204ENST00000594965 USP10Q14694 798 aaKnown RBP21.2■□□□□ 0.98
GTF2F1-204ENST00000594965 EFTUD2Q15029 972 aaKnown RBP eCLIP21.2■□□□□ 0.98
GTF2F1-204ENST00000594965 ZKSCAN8Q15776 578 aaPredicted RBP21.2■□□□□ 0.98
GTF2F1-204ENST00000594965 SYT16Q17RD7 645 aa21.2■□□□□ 0.98
GTF2F1-204ENST00000594965 CATSPEREQ5SY80 951 aa21.2■□□□□ 0.98
GTF2F1-204ENST00000594965 CTAGE3PQ8IX95 158 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms