RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 CHAF1BQ13112 559 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ATP1A4Q13733 1029 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 NKG7Q16617 165 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 MUM1Q2TAK8 710 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 GARNL3Q5VVW2 1013 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PRAMEF13Q5VWM6 474 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 CPZQ66K79 652 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 TMEM207Q6UWW9 146 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ADCK2Q7Z695 626 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 C17orf64Q86WR6 236 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 CSNK1A1LQ8N752 337 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 TEX19Q8NA77 164 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ATL1Q8WXF7 558 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 CDKL2Q92772 493 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 NACC2Q96BF6 587 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ALKBH8Q96BT7 664 aaKnown RBP9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 VPS39Q96JC1 886 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 CABS1Q96KC9 395 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 FER1L6-AS2Q96M78 137 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 HAUS8Q9BT25 410 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 SGPP1Q9BX95 441 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ATG10Q9H0Y0 220 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 RHOJQ9H4E5 214 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 MLXIPLQ9NP71 852 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 SMYD2Q9NRG4 433 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 CUEDC1Q9NWM3 386 aaPredicted RBP9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 NOVA2Q9UNW9 492 aaKnown RBP9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PCDHGB7Q9Y5F8 929 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PCDHGA9Q9Y5G4 932 aaKnown RBP9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 MYO18BQ8IUG5 2567 aa9.28□□□□□ -0.92
TNFRSF1A-214ENST00000543048 A6NL46 340 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 VSTM2BA6NLU5 285 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 CXorf49A8MYA2 514 aaPredicted RBP9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 HAT1O14929 419 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 KLHL41O60662 606 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 CEACAM4O75871 244 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 MED26O95402 600 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 UMODP07911 640 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 ENO2P09104 434 aaPredicted RBP9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 NR1D1P20393 614 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 GRK3P35626 688 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 CASRP41180 1078 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 MAGEA4P43358 317 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 PGDP52209 483 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 SLC12A2P55011 1212 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 TAS2R39P59534 338 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 RPS15AP62244 130 aaKnown RBP9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 POU4F1Q01851 419 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 OCA2Q04671 838 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 TRADDQ15628 312 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 NDUFA9Q16795 377 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 PHKG1Q16816 387 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 HKDC1Q2TB90 917 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 TEX35Q5T0J7 233 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 CAPN13Q6MZZ7 669 aaPredicted RBP9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 LCTLQ6UWM7 567 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 MBOAT1Q6ZNC8 495 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 CAPN12Q6ZSI9 719 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 COX15Q7KZN9 410 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 PPP1R32Q7Z5V6 425 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 MRGPREQ86SM8 312 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 PLD3Q8IV08 490 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 MMGT1Q8N4V1 131 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 METTL27Q8N6F8 245 aaPredicted RBP9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 FBXL8Q96CD0 374 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 MVB12AQ96EY5 273 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 C10orf90Q96M02 699 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 MCMBPQ9BTE3 642 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 PHACTR1Q9C0D0 580 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 POPDC3Q9HBV1 291 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 ATP13A2Q9NQ11 1180 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 P4HTMQ9NXG6 502 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 TXNDC16Q9P2K2 825 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 NXT1Q9UKK6 140 aaKnown RBP9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 G3BP2Q9UN86 482 aaKnown RBP9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 RUVBL1Q9Y265 456 aaKnown RBP9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 MTO1Q9Y2Z2 717 aaKnown RBP9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 ZNF451Q9Y4E5 1061 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 MAU2Q9Y6X3 613 aa9.27□□□□□ -0.93
TNFRSF1A-214ENST00000543048 FAM159BA6NKW6 160 aa9.26□□□□□ -0.93
TNFRSF1A-214ENST00000543048 AGPSO00116 658 aa9.26□□□□□ -0.93
TNFRSF1A-214ENST00000543048 PRPF4O43172 522 aaKnown RBP eCLIP9.26□□□□□ -0.935e-7■■■■□ 24.8
TNFRSF1A-214ENST00000543048 CTIFO43310 598 aaKnown RBP9.26□□□□□ -0.93
TNFRSF1A-214ENST00000543048 PIAS1O75925 651 aa9.26□□□□□ -0.93
TNFRSF1A-214ENST00000543048 WISP1O95388 367 aa9.26□□□□□ -0.93
TNFRSF1A-214ENST00000543048 GUCA1CO95843 209 aa9.26□□□□□ -0.93
TNFRSF1A-214ENST00000543048 ZGLP1P0C6A0 271 aa9.26□□□□□ -0.93
TNFRSF1A-214ENST00000543048 ZNF37AP17032 561 aaPredicted RBP9.26□□□□□ -0.93
TNFRSF1A-214ENST00000543048 FBLP22087 321 aaKnown RBP9.26□□□□□ -0.93
TNFRSF1A-214ENST00000543048 MMP11P24347 488 aa9.26□□□□□ -0.93
TNFRSF1A-214ENST00000543048 SLC26A3P40879 764 aa9.26□□□□□ -0.93
TNFRSF1A-214ENST00000543048 SOX8P57073 446 aa9.26□□□□□ -0.93
TNFRSF1A-214ENST00000543048 FOXL2P58012 376 aa9.26□□□□□ -0.93
TNFRSF1A-214ENST00000543048 GPX6P59796 221 aa9.26□□□□□ -0.93
TNFRSF1A-214ENST00000543048 TBPL1P62380 186 aa9.26□□□□□ -0.93
TNFRSF1A-214ENST00000543048 CSNK1G2P78368 415 aa9.26□□□□□ -0.93
TNFRSF1A-214ENST00000543048 SLC7A5Q01650 507 aa9.26□□□□□ -0.93
TNFRSF1A-214ENST00000543048 FAM53BQ14153 422 aa9.26□□□□□ -0.93
TNFRSF1A-214ENST00000543048 ZXDCQ2QGD7 858 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms