RNA–Protein interactions for RNA: ENST00000527373.1

UBQLN1-204, Transcript of ubiquilin 1, humanhuman

TSL 2

Gene UBQLN1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-204ENST00000527373 HHATQ5VTY9 493 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 HIST2H2AA3Q6FI13 130 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 FRMPD2BQ6IN97 320 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 ZNF425Q6IV72 752 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 FBXO42Q6P3S6 717 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 TMEM126BQ8IUX1 230 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 C10orf107Q8IVU9 208 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 LSMEM2Q8N112 164 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 KRT78Q8N1N4 520 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 ZNF655Q8N720 491 aaPredicted RBP10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 BMPERQ8N8U9 685 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 ABHD11Q8NFV4 315 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 OR1L3Q8NH93 324 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 PPP1R14CQ8TAE6 165 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 MGARPQ8TDB4 240 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 CCT6BQ92526 530 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 PMEPA1Q969W9 287 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 MOCOSQ96EN8 888 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 NSUN5Q96P11 429 aaKnown RBP10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 TMEM237Q96Q45 408 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 ERVK-6Q9BXR3 956 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 ASPSCR1Q9BZE9 553 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 SPRTNQ9H040 489 aaPredicted RBP10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 NOL11Q9H8H0 719 aaKnown RBP10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 ACTR8Q9H981 624 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 PELI2Q9HAT8 420 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 MLXIPLQ9NP71 852 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 STARD5Q9NSY2 213 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 SIDT1Q9NXL6 827 aaKnown RBP10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 NKIRAS1Q9NYS0 192 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 COPG2Q9UBF2 871 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 WASF3Q9UPY6 502 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 PCDHGA8Q9Y5G5 932 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 ACTL7BQ9Y614 415 aa10.04□□□□□ -0.8
UBQLN1-204ENST00000527373 SPEGQ15772 3267 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 LOC105369274A0A096LPK9 316 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 LOC102723532A0A0G2JNH3 316 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 TRBC2A0A5B9 178 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 TMEM120BA0PK00 339 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 C2orf72A6NCS6 295 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 E2F3O00716 465 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 TM9SF1O15321 606 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 TYROBPO43914 113 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 LCMT2O60294 686 aaKnown RBP10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 SRPX2O60687 465 aaPredicted RBP10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 TRIM13O60858 407 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 KIAA0754O94854 1291 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 ZWINTO95229 277 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 NTRK1P04629 796 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 PCNAP12004 261 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 IMPDH1P20839 514 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 ALDH3A1P30838 453 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 SLC5A2P31639 672 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 NAGLUP54802 743 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 CYP4F2P78329 520 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 CLCQ05315 142 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 ASPHQ12797 758 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 LAPTM5Q13571 262 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 DOC2AQ14183 400 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 RTP5Q14D33 572 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 UNC50Q53HI1 259 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 TNFAIP8L3Q5GJ75 292 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 PAGE2BQ5JRK9 111 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 WASHC2DQ5SRD0 308 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 ZNF678Q5SXM1 525 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 PRAMEF17Q5VTA0 474 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 LIPMQ5VYY2 423 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 ATG9BQ674R7 924 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 SLCO4C1Q6ZQN7 724 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 RNF44Q7L0R7 432 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 MILR1Q7Z6M3 343 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 BPHLQ86WA6 291 aaPredicted RBP10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 NUDCD3Q8IVD9 361 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 OR4N4Q8N0Y3 316 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 TTC29Q8NA56 475 aaPredicted RBP10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 ZNF740Q8NDX6 193 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 OR8K5Q8NH50 307 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 TRPC4APQ8TEL6 797 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 TLCD1Q96CP7 247 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 ZNF501Q96CX3 271 aaPredicted RBP10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 CLIP3Q96DZ5 547 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 PTCD3Q96EY7 689 aaKnown RBP10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 ATP6V1G3Q96LB4 118 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 SLC46A1Q96NT5 459 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 CDK15Q96Q40 435 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 TEFMQ96QE5 360 aaKnown RBP10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 MECRQ9BV79 373 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 NLNQ9BYT8 704 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 CHRNA10Q9GZZ6 450 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 DRC3Q9H069 523 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 SPNS1Q9H2V7 528 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 SSU72Q9NP77 194 aaKnown RBP10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 THSD1Q9NS62 852 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 ZNF446Q9NWS9 450 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 NDOR1Q9UHB4 597 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 PCTPQ9UKL6 214 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 KLK4Q9Y5K2 254 aa10.03□□□□□ -0.8
UBQLN1-204ENST00000527373 MDC1Q14676 2089 aaKnown RBP10.02□□□□□ -0.81
UBQLN1-204ENST00000527373 ANKDD1BA6NHY2 528 aa10.02□□□□□ -0.81
UBQLN1-204ENST00000527373 C9orf172C9J069 976 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms