RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	FBXO30	Q8TB52	745 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	ZNF480	Q8WV37	535 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	GTF2H4	Q92759	462 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	GATA6	Q92908	595 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	GFM2	Q969S9	779 aa	Known RBP	10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	BIRC7	Q96CA5	298 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	CXorf40B	Q96DE9	158 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	CHFR	Q96EP1	664 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	AIF1L	Q9BQI0	150 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	CPPED1	Q9BRF8	314 aa	Predicted RBP	10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	TBCD	Q9BTW9	1192 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	RAB11FIP5	Q9BXF6	653 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	MRPS26	Q9BYN8	205 aa	Known RBP	10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	ASPSCR1	Q9BZE9	553 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	EHD1	Q9H4M9	534 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	AHSP	Q9NZD4	102 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	VAPA	Q9P0L0	249 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	SPATA7	Q9P0W8	599 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	BAG5	Q9UL15	447 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	VPS4A	Q9UN37	437 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	PCDHGB4	Q9UN71	923 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	NCKAP1	Q9Y2A7	1128 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	MAN2B2	Q9Y2E5	1009 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	ORC6	Q9Y5N6	252 aa		10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.4	□□□□□ -0.74
SPIDR-222	ENST00000524006	NUP214	P35658	2090 aa	Predicted RBP	10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	DPPA5	A6NC42	116 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	CACNB4	O00305	520 aa	Predicted RBP	10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	SCAMP2	O15127	329 aa	Known RBP	10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	CPSF4	O95639	269 aa	Known RBP	10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	C7	P10643	843 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	MYCLP1	P12525	358 aa	Predicted RBP	10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	TEAD1	P28347	426 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	OXTR	P30559	389 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	SERPINB1	P30740	379 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	HNRNPF	P52597	415 aa	Known RBP	10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	TPD52	P55327	224 aa	Predicted RBP	10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	RPS13	P62277	151 aa	Known RBP	10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	ZNF763	Q0D2J5	394 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	ABHD18	Q0P651	414 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	SELPLG	Q14242	412 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	ARHGAP19	Q14CB8	494 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	CCSMST1	Q4G0I0	132 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	RUNDC3A	Q59EK9	446 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	AGBL4	Q5VU57	503 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	NAIF1	Q69YI7	327 aa	Predicted RBP	10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	OR4F3	Q6IEY1	312 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	SYCE2	Q6PIF2	218 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	PARM1	Q6UWI2	310 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	LCTL	Q6UWM7	567 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	ANGPTL8	Q6UXH0	198 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	SLCO4C1	Q6ZQN7	724 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	DTWD1	Q8N5C7	304 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	TBC1D19	Q8N5T2	526 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	SMRP1	Q8NCR6	262 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	OR7G3	Q8NG95	312 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	OR14C36	Q8NHC7	312 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	HUS1B	Q8NHY5	278 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	WDR20	Q8TBZ3	569 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	SETD7	Q8WTS6	366 aa	Known RBP	10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	CYGB	Q8WWM9	190 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	EDA	Q92838	391 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	FOXJ1	Q92949	421 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	NEIL2	Q969S2	332 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	ZNF597	Q96LX8	424 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	NECTIN4	Q96NY8	510 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	DUSP26	Q9BV47	211 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	SPATA9	Q9BWV2	254 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	SGPP1	Q9BX95	441 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	PLA2G2F	Q9BZM2	168 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	REXO4	Q9GZR2	422 aa	Known RBP	10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	PNPLA3	Q9NST1	481 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	SPATA6	Q9NWH7	488 aa	Predicted RBP	10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	SLAMF8	Q9P0V8	285 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	ADGRE2	Q9UHX3	823 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	ACSL5	Q9ULC5	683 aa		10.39	□□□□□ -0.75
SPIDR-222	ENST00000524006	TCRBV5S2	A0A599	114 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	FAM149A	A5PLN7	773 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	ANKDD1B	A6NHY2	528 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	MAGEB17	A8MXT2	336 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	LILRB5	O75023	590 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	SH3BGRL	O75368	114 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	E2F6	O75461	281 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	RASAL1	O95294	804 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	ALB	P02768	609 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	GSN	P06396	782 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	ACADM	P11310	421 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	ACP5	P13686	325 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	HOXB2	P14652	356 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	HRH2	P25021	359 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	NTSR1	P30989	418 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	SH3BGR	P55822	239 aa	Predicted RBP	10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	KIAA0040	Q15053	153 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	ADRM1	Q16186	407 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	HKDC1	Q2TB90	917 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	LRIF1	Q5T3J3	769 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	HMBOX1	Q6NT76	420 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	NXPE4	Q6UWF7	544 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	ZNF621	Q6ZSS3	439 aa		10.38	□□□□□ -0.75
SPIDR-222	ENST00000524006	TICAM1	Q8IUC6	712 aa		10.38	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms