RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 GPR19Q15760 415 aa17.38■□□□□ 0.37
VEGFA-222ENST00000520948 THEMIS2Q5TEJ8 643 aa17.38■□□□□ 0.37
VEGFA-222ENST00000520948 NLGN4XQ8N0W4 816 aa17.38■□□□□ 0.37
VEGFA-222ENST00000520948 NLGN4YQ8NFZ3 816 aaPredicted RBP17.38■□□□□ 0.37
VEGFA-222ENST00000520948 UBTD2Q8WUN7 234 aa17.38■□□□□ 0.37
VEGFA-222ENST00000520948 ESAMQ96AP7 390 aa17.38■□□□□ 0.37
VEGFA-222ENST00000520948 HAUS8Q9BT25 410 aa17.38■□□□□ 0.37
VEGFA-222ENST00000520948 CD244Q9BZW8 370 aa17.38■□□□□ 0.37
VEGFA-222ENST00000520948 FGF21Q9NSA1 209 aa17.38■□□□□ 0.37
VEGFA-222ENST00000520948 TMEM184CQ9NVA4 438 aa17.38■□□□□ 0.37
VEGFA-222ENST00000520948 CUEDC1Q9NWM3 386 aaPredicted RBP17.38■□□□□ 0.37
VEGFA-222ENST00000520948 SOHLH2Q9NX45 425 aa17.38■□□□□ 0.37
VEGFA-222ENST00000520948 XPR1Q9UBH6 696 aa17.38■□□□□ 0.37
VEGFA-222ENST00000520948 SNX7Q9UNH6 387 aa17.38■□□□□ 0.37
VEGFA-222ENST00000520948 SLC22A14Q9Y267 594 aa17.38■□□□□ 0.37
VEGFA-222ENST00000520948 LOC101059948A0A1B0GTJ6 334 aa17.37■□□□□ 0.37
VEGFA-222ENST00000520948 SUPT3HB4E1H0 165 aa17.37■□□□□ 0.37
VEGFA-222ENST00000520948 POLR1CO15160 346 aaPredicted RBP17.37■□□□□ 0.37
VEGFA-222ENST00000520948 NRP2O60462 931 aa17.37■□□□□ 0.37
VEGFA-222ENST00000520948 CTSVO60911 334 aa17.37■□□□□ 0.37
VEGFA-222ENST00000520948 SUPT3HO75486 399 aa17.37■□□□□ 0.37
VEGFA-222ENST00000520948 IPO13O94829 963 aaKnown RBP17.37■□□□□ 0.37
VEGFA-222ENST00000520948 KRT4P19013 534 aa17.37■□□□□ 0.37
VEGFA-222ENST00000520948 CRHR1P34998 444 aa17.37■□□□□ 0.37
VEGFA-222ENST00000520948 SETDB1Q15047 1291 aa17.37■□□□□ 0.37
VEGFA-222ENST00000520948 FBXO48Q5FWF7 155 aa17.37■□□□□ 0.37
VEGFA-222ENST00000520948 TIPARPQ7Z3E1 657 aaKnown RBP17.37■□□□□ 0.37
VEGFA-222ENST00000520948 C17orf64Q86WR6 236 aa17.37■□□□□ 0.37
VEGFA-222ENST00000520948 ABHD11Q8NFV4 315 aa17.37■□□□□ 0.37
VEGFA-222ENST00000520948 OR4K1Q8NGD4 311 aa17.37■□□□□ 0.37
VEGFA-222ENST00000520948 EXT2Q93063 718 aa17.37■□□□□ 0.37
VEGFA-222ENST00000520948 KIAA1143Q96AT1 154 aaPredicted RBP17.37■□□□□ 0.37
VEGFA-222ENST00000520948 ALKBH8Q96BT7 664 aaKnown RBP17.37■□□□□ 0.37
VEGFA-222ENST00000520948 SLC45A3Q96JT2 553 aa17.37■□□□□ 0.37
VEGFA-222ENST00000520948 TSNARE1Q96NA8 513 aa17.37■□□□□ 0.37
VEGFA-222ENST00000520948 FCRL4Q96PJ5 515 aa17.37■□□□□ 0.37
VEGFA-222ENST00000520948 ZPBPQ9BS86 351 aa17.37■□□□□ 0.37
VEGFA-222ENST00000520948 MRPL46Q9H2W6 279 aaKnown RBP17.37■□□□□ 0.37
VEGFA-222ENST00000520948 ZNF71Q9NQZ8 489 aaPredicted RBP17.37■□□□□ 0.37
VEGFA-222ENST00000520948 ABCF3Q9NUQ8 709 aa17.37■□□□□ 0.37
VEGFA-222ENST00000520948 EMCNQ9ULC0 261 aa17.37■□□□□ 0.37
VEGFA-222ENST00000520948 ASB1Q9Y576 335 aa17.37■□□□□ 0.37
VEGFA-222ENST00000520948 PTPN13Q12923 2485 aa17.37■□□□□ 0.37
VEGFA-222ENST00000520948 NAV2Q8IVL1 2488 aa17.37■□□□□ 0.37
VEGFA-222ENST00000520948 H7BY64 318 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 MAP3K7O43318 606 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 STK16O75716 305 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 S100BP04271 92 aaPredicted RBP17.36■□□□□ 0.37
VEGFA-222ENST00000520948 HSPA7P48741 367 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 AGTR2P50052 363 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 ALDH18A1P54886 795 aaKnown RBP17.36■□□□□ 0.37
VEGFA-222ENST00000520948 CSNK1G2P78368 415 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 SRSF1Q07955 248 aaKnown RBP eCLIP17.36■□□□□ 0.371e-7■■□□□ 13.3
VEGFA-222ENST00000520948 FOXM1Q08050 763 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 CDC20Q12834 499 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 TUBB3Q13509 450 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 PCBP2Q15366 365 aaKnown RBP eCLIP17.36■□□□□ 0.371e-10■■□□□ 11.4
VEGFA-222ENST00000520948 KRT71Q3SY84 523 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.36■□□□□ 0.372e-8■□□□□ 9.4
VEGFA-222ENST00000520948 CEP85LQ5SZL2 805 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 C16orf46Q6P387 395 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 CEACAM20Q6UY09 585 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 RNF44Q7L0R7 432 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 CROCCP2Q86T23 111 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 OR8K5Q8NH50 307 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 OR1L3Q8NH93 324 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 NEIL2Q969S2 332 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 SCYL1Q96KG9 808 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 ZNF285Q96NJ3 590 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 PRAP1Q96NZ9 151 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 CATSPER2Q96P56 530 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 TEFMQ96QE5 360 aaKnown RBP17.36■□□□□ 0.37
VEGFA-222ENST00000520948 CNOT10Q9H9A5 744 aaKnown RBP17.36■□□□□ 0.37
VEGFA-222ENST00000520948 MKS1Q9NXB0 559 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 WWOXQ9NZC7 414 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 CPSF2Q9P2I0 782 aaKnown RBP17.36■□□□□ 0.37
VEGFA-222ENST00000520948 TMCO1Q9UM00 188 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 PLCL2Q9UPR0 1127 aa17.36■□□□□ 0.37
VEGFA-222ENST00000520948 GLRA3O75311 464 aa17.35■□□□□ 0.37
VEGFA-222ENST00000520948 STK17BO94768 372 aa17.35■□□□□ 0.37
VEGFA-222ENST00000520948 WDR47O94967 919 aa17.35■□□□□ 0.37
VEGFA-222ENST00000520948 CTSBP07858 339 aa17.35■□□□□ 0.37
VEGFA-222ENST00000520948 EPORP19235 508 aa17.35■□□□□ 0.37
VEGFA-222ENST00000520948 CCT5P48643 541 aa17.35■□□□□ 0.37
VEGFA-222ENST00000520948 PCDH1Q08174 1060 aa17.35■□□□□ 0.37
VEGFA-222ENST00000520948 CASP8Q14790 479 aa17.35■□□□□ 0.37
VEGFA-222ENST00000520948 IGFBP7Q16270 282 aa17.35■□□□□ 0.37
VEGFA-222ENST00000520948 PFKFB4Q16877 469 aa17.35■□□□□ 0.37
VEGFA-222ENST00000520948 ZC3H12BQ5HYM0 836 aaKnown RBP17.35■□□□□ 0.37
VEGFA-222ENST00000520948 ATP1A1-AS1Q5TC04 95 aa17.35■□□□□ 0.37
VEGFA-222ENST00000520948 METTL2BQ6P1Q9 378 aaKnown RBP17.35■□□□□ 0.37
VEGFA-222ENST00000520948 CYB5D1Q6P9G0 228 aa17.35■□□□□ 0.37
VEGFA-222ENST00000520948 MCATQ8IVS2 390 aaKnown RBP17.35■□□□□ 0.37
VEGFA-222ENST00000520948 C4orf33Q8N1A6 199 aa17.35■□□□□ 0.37
VEGFA-222ENST00000520948 BANPQ8N9N5 519 aa17.35■□□□□ 0.37
VEGFA-222ENST00000520948 C9orf43Q8TAL5 461 aaPredicted RBP17.35■□□□□ 0.37
VEGFA-222ENST00000520948 PGM2Q96G03 612 aa17.35■□□□□ 0.37
VEGFA-222ENST00000520948 SARGQ9BW04 601 aa17.35■□□□□ 0.37
VEGFA-222ENST00000520948 SYNPO2LQ9H987 977 aa17.35■□□□□ 0.37
VEGFA-222ENST00000520948 DNAJC11Q9NVH1 559 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms