RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 A0A1W2PRB8 838 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 CXCR6O00574 342 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 FABP3P05413 133 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 GLAP06280 429 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 CPT2P23786 658 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 MC4RP32245 332 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 AHRP35869 848 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ADCYAP1R1P41586 468 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 STT3AP46977 705 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 AP2S1P53680 142 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ATN1P54259 1190 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 CXCR4P61073 352 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 RPS3AP61247 264 aaKnown RBP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ACY1Q03154 408 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 GPR139Q6DWJ6 353 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ARHGAP11AQ6P4F7 1023 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 CNSTQ6PJW8 725 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 CXCL17Q6UXB2 119 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 TCEAL8Q8IYN2 117 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 KIAA0319LQ8IZA0 1049 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ZNF786Q8N393 782 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 AKAP1Q92667 903 aaKnown RBP eCLIP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 SLC35B4Q969S0 331 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 PDLIM5Q96HC4 596 aaKnown RBP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ZNF317Q96PQ6 595 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ACOX2Q99424 681 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 NPLQ9BXD5 320 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ANKRD19PQ9H560 264 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ZDHHC6Q9H6R6 413 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 KAT8Q9H7Z6 458 aaKnown RBP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ARNT2Q9HBZ2 717 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 MED17Q9NVC6 651 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 MED11Q9P086 117 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 CDH22Q9UJ99 828 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 RIF1Q5UIP0 2472 aaKnown RBP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 A0A0U1RQJ8 604 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 TRIM64CA6NLI5 447 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 PIRO00625 290 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 TGFB1I1O43294 461 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 FAM20BO75063 409 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 PIGNO95427 931 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 C8AP07357 584 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 PTBP1P26599 531 aaKnown RBP eCLIP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 GABRR2P28476 465 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 CNR2P34972 360 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 E2F1Q01094 437 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 RBPJQ06330 500 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 TAF10Q12962 218 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 GRIK5Q16478 980 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 STEAP4Q687X5 459 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 REEP3Q6NUK4 255 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ZNF852Q6ZMS4 543 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 UNC5AQ6ZN44 842 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 NOXA1Q86UR1 476 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 SLC25A41Q8N5S1 370 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 OR9A1PQ8NGU1 263 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 SLC35B2Q8TB61 432 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 PSMG2Q969U7 264 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 SLC47A1Q96FL8 570 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ARL5BQ96KC2 179 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 KCNF1Q9H3M0 494 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 PLEKHA1Q9HB21 404 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 GIN1Q9NXP7 522 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ARHGAP21Q5T5U3 1957 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 CDHR4A6H8M9 788 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 A6NIZ1 184 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 UBFD1O14562 309 aaKnown RBP4.8□□□□□ -1.64
PTPN13-209ENST00000511467 NRP1O14786 923 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 TP73O15350 636 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 JRKO75564 520 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 SLC10A3P09131 477 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 ITGB7P26010 798 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 RORAP35398 523 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 DGKGP49619 791 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 RAP1BP61224 184 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 RAP1AP62834 184 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 MTM1Q13496 603 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 RCAN2Q14206 197 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 DSC3Q14574 896 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 PTGR1Q14914 329 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 RUNDC3AQ59EK9 446 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 ALG1LQ6GMV1 187 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 RAB12Q6IQ22 244 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 DENND5AQ6IQ26 1287 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 CEP68Q76N32 757 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 MTDHQ86UE4 582 aaKnown RBP4.8□□□□□ -1.64
PTPN13-209ENST00000511467 POC5Q8NA72 575 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 RFWD2Q8NHY2 731 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 UFD1Q92890 307 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 HDAC10Q969S8 669 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 LGR4Q9BXB1 951 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 CD244Q9BZW8 370 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 SHANK1Q9Y566 2161 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 ATP6AP2A0A1C7CYW4 349 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 A0A1W2PPC1 479 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 NOTOA8MTQ0 251 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 AP5Z1O43299 807 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 MATN1P21941 496 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 UQCRC2P22695 453 aa4.8□□□□□ -1.64
PTPN13-209ENST00000511467 AGTR1P30556 359 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms