RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 ROPN1BQ9BZX4 212 aaPredicted RBP14.34□□□□□ -0.11
RNF4-210ENST00000508235 MRPL46Q9H2W6 279 aaKnown RBP14.34□□□□□ -0.11
RNF4-210ENST00000508235 ROPN1Q9HAT0 212 aaPredicted RBP14.34□□□□□ -0.11
RNF4-210ENST00000508235 CUTCQ9NTM9 273 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 CROTQ9UKG9 612 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 SH2B3Q9UQQ2 575 aa14.34□□□□□ -0.11
RNF4-210ENST00000508235 TNPO3Q9Y5L0 923 aaKnown RBP14.34□□□□□ -0.11
RNF4-210ENST00000508235 LOC101059948A0A1B0GTJ6 334 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 A0A1B0GX78 115 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 SMIM23A6NLE4 172 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 C9J4A7 227 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 MAP2K7O14733 419 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 DSCR3O14972 297 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 KLK8O60259 260 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 CCNT2O60583 730 aaKnown RBP14.33□□□□□ -0.12
RNF4-210ENST00000508235 SMIM24O75264 130 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 ERLIN1O75477 346 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 GSTA1P08263 222 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 MTHFD2P13995 350 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 LIFP15018 202 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 TCN2P20062 427 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 GDF5P43026 501 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 SLCO1A2P46721 670 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 RPS15P62841 145 aaKnown RBP14.33□□□□□ -0.12
RNF4-210ENST00000508235 DCDP81605 110 aaKnown RBP14.33□□□□□ -0.12
RNF4-210ENST00000508235 MC1RQ01726 317 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 VAC14Q08AM6 782 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 SETDB1Q15047 1291 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 NDUFA9Q16795 377 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 MUM1Q2TAK8 710 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 PRTGQ2VWP7 1150 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 C18orf21Q32NC0 220 aaPredicted RBP14.33□□□□□ -0.12
RNF4-210ENST00000508235 GARNL3Q5VVW2 1013 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 NXPE4Q6UWF7 544 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 TMPRSS11BQ86T26 416 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 VASH2Q86V25 355 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 SNX31Q8N9S9 440 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 MFSD9Q8NBP5 474 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 CAMKVQ8NCB2 501 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 EPS8L3Q8TE67 593 aaKnown RBP14.33□□□□□ -0.12
RNF4-210ENST00000508235 CT55Q8WUE5 264 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 PITHD1Q9GZP4 211 aaPredicted RBP14.33□□□□□ -0.12
RNF4-210ENST00000508235 EHD1Q9H4M9 534 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 CPSF2Q9P2I0 782 aaKnown RBP14.33□□□□□ -0.12
RNF4-210ENST00000508235 OPTCQ9UBM4 332 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 DCDC2Q9UHG0 476 aa14.33□□□□□ -0.12
RNF4-210ENST00000508235 AHCTF1Q8WYP5 2266 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 CHD8Q9HCK8 2581 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 MAP1BP46821 2468 aaKnown RBP14.32□□□□□ -0.12
RNF4-210ENST00000508235 ZNF891A8MT65 544 aaPredicted RBP14.32□□□□□ -0.12
RNF4-210ENST00000508235 K7ENP7 123 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 K7EPI3 171 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 CTSBP07858 339 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 RAB40ALP0C0E4 278 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 SLC35G6P0C7Q6 338 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 C1GALT1C1LP0DN25 315 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 ALAS2P22557 587 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 GSTM2P28161 218 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 AHRP35869 848 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 GCGRP47871 477 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 PIK3CGP48736 1102 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 CXADRP78310 365 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 DNASE1L3Q13609 305 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 PFKFB4Q16877 469 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 CATSPEREQ5SY80 951 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 ATG9BQ674R7 924 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 PRMT9Q6P2P2 845 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 INO80CQ6PI98 192 aaPredicted RBP14.32□□□□□ -0.12
RNF4-210ENST00000508235 TTLL10Q6ZVT0 673 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 KRT78Q8N1N4 520 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 MZB1Q8WU39 189 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 RNF31Q96EP0 1072 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 MVB12AQ96EY5 273 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 SLC45A3Q96JT2 553 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 GBP5Q96PP8 586 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 STARD5Q9NSY2 213 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 XPR1Q9UBH6 696 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 DHCR7Q9UBM7 475 aaKnown RBP14.32□□□□□ -0.12
RNF4-210ENST00000508235 NDOR1Q9UHB4 597 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 GPN3Q9UHW5 284 aaPredicted RBP14.32□□□□□ -0.12
RNF4-210ENST00000508235 CDC14AQ9UNH5 594 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 PADI2Q9Y2J8 665 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 ANGPTL3Q9Y5C1 460 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 PCDHGA6Q9Y5G7 932 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 PCDHGA4Q9Y5G9 962 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 IGF2RP11717 2491 aa14.32□□□□□ -0.12
RNF4-210ENST00000508235 TLDC2A0PJX2 215 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 FEZF1A0PJY2 475 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 STX16-NPEPL1H3BU86 382 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 STX16O14662 325 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 PRPF4O43172 522 aaKnown RBP eCLIP14.31□□□□□ -0.12
RNF4-210ENST00000508235 EFSO43281 561 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 OR1F1O43749 312 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 KATNA1O75449 491 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 RECKO95980 971 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 PYGBP11216 843 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 EPB42P16452 691 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 TAC1P20366 129 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 PTPN4P29074 926 aa14.31□□□□□ -0.12
RNF4-210ENST00000508235 BCL6P41182 706 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms