RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 PVRP15151 417 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 ALOX15P16050 662 aaPredicted RBP5.71□□□□□ -1.5
USP39-213ENST00000467885 CMPK1P30085 196 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 HNF4AP41235 474 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 GRK6P43250 576 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 GABRA4P48169 554 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 DUSP3P51452 185 aaPredicted RBP5.71□□□□□ -1.5
USP39-213ENST00000467885 CCR8P51685 355 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 CCNG1P51959 295 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 MEF2AQ02078 507 aaPredicted RBP5.71□□□□□ -1.5
USP39-213ENST00000467885 ZFP36L1Q07352 338 aaKnown RBP5.71□□□□□ -1.5
USP39-213ENST00000467885 TUBB3Q13509 450 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 LAPTM5Q13571 262 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 ABRAXAS2Q15018 415 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 KIAA0040Q15053 153 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 PLCL1Q15111 1095 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 CPSF6Q16630 551 aaKnown RBP eCLIP5.71□□□□□ -1.5
USP39-213ENST00000467885 SLC5A12Q1EHB4 618 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 LINC01559Q495D7 138 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 GGTA1PQ4G0N0 100 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 TCHHL1Q5QJ38 904 aaPredicted RBP5.71□□□□□ -1.5
USP39-213ENST00000467885 SH2D4BQ5SQS7 431 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 THEMIS2Q5TEJ8 643 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 STPG1Q5TH74 334 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 VWA5B1Q5TIE3 1220 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 PRAMEF13Q5VWM6 474 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 KANK2Q63ZY3 851 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 CLEC6AQ6EIG7 209 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 ADNP2Q6IQ32 1131 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 TMEM71Q6P5X7 295 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 KLHL35Q6PF15 583 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 SCIMPQ6UWF3 145 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 RNF165Q6ZSG1 346 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 LARP4Q71RC2 724 aaKnown RBP eCLIP5.71□□□□□ -1.5
USP39-213ENST00000467885 EFL1Q7Z2Z2 1120 aaKnown RBP5.71□□□□□ -1.5
USP39-213ENST00000467885 ARHGAP22Q7Z5H3 698 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 VN1R5Q7Z5H4 357 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 SPRED1Q7Z699 444 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 TRIM73Q86UV7 250 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 PAQR7Q86WK9 346 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 CRLF3Q8IUI8 442 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 RNF175Q8N4F7 328 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 RAB42Q8N4Z0 105 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 CDYL2Q8N8U2 506 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 OR10G6Q8NH81 332 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 CREB3L4Q8TEY5 395 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 KLHL6Q8WZ60 621 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 USP7Q93009 1102 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 CCDC74AQ96AQ1 378 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 PTCD3Q96EY7 689 aaKnown RBP5.71□□□□□ -1.5
USP39-213ENST00000467885 OR2A5Q96R48 311 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 MAP3K3Q99759 626 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 PITHD1Q9GZP4 211 aaPredicted RBP5.71□□□□□ -1.5
USP39-213ENST00000467885 CHRNA10Q9GZZ6 450 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 SEMA6CQ9H3T2 930 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 LRRN3Q9H3W5 708 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 EPB41L1Q9H4G0 881 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 WDR55Q9H6Y2 383 aaPredicted RBP5.71□□□□□ -1.5
USP39-213ENST00000467885 ACTR8Q9H981 624 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 PELI2Q9HAT8 420 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 MRPS30Q9NP92 439 aaKnown RBP5.71□□□□□ -1.5
USP39-213ENST00000467885 TMEM9BQ9NQ34 198 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 C1GALT1Q9NS00 363 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 FGFR1OP2Q9NVK5 253 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 KCNK4Q9NYG8 393 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 TMEM9Q9P0T7 183 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 VTI1BQ9UEU0 232 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 TRPS1Q9UHF7 1281 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 DYRK1BQ9Y463 629 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 PCDHGA11Q9Y5H2 935 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 USH1CQ9Y6N9 552 aa5.71□□□□□ -1.5
USP39-213ENST00000467885 CEP192Q8TEP8 1941 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 PIKFYVEQ9Y2I7 2098 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 CACNA1HO95180 2353 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 TNRC6BQ9UPQ9 1833 aaKnown RBP5.7□□□□□ -1.5
USP39-213ENST00000467885 PCDH15Q96QU1 1955 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 LOC105369274A0A096LPK9 316 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 LOC102723532A0A0G2JNH3 316 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 TRBC2A0A5B9 178 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 FEZF1A0PJY2 475 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 NPIPB8E9PQR5 432 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 H3BMH7 237 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 FOXE1O00358 373 aaPredicted RBP5.7□□□□□ -1.5
USP39-213ENST00000467885 SDHDO14521 159 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 FFAR3O14843 346 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 GPR42O15529 346 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 FOXD2O60548 495 aaPredicted RBP5.7□□□□□ -1.5
USP39-213ENST00000467885 ULK1O75385 1050 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 FAM107AO95990 144 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 PDYNP01213 254 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 ENO1P06733 434 aaKnown RBP5.7□□□□□ -1.5
USP39-213ENST00000467885 CTSBP07858 339 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 SMIM10L1P0DMW3 83 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 ST6GAL1P15907 406 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 PTX3P26022 381 aaPredicted RBP5.7□□□□□ -1.5
USP39-213ENST00000467885 PIK3CBP42338 1070 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 SCTRP47872 440 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 HTR6P50406 440 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 INHBCP55103 352 aa5.7□□□□□ -1.5
USP39-213ENST00000467885 GFERP55789 205 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms