RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 STXBP5Q5T5C0 1151 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 TXNDC8Q6A555 127 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 MEX3BQ6ZN04 569 aaKnown RBP4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 DENND5BQ6ZUT9 1274 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 LPCAT2Q7L5N7 544 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 TRMT11Q7Z4G4 463 aaKnown RBP4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 HSCBQ8IWL3 235 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 EFCAB13Q8IY85 973 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 CEP57L1Q8IYX8 460 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 CPXM2Q8N436 756 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 MINDY1Q8N5J2 469 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 PDILTQ8N807 584 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 XXYLT1Q8NBI6 393 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 LINC00301Q8NCQ3 95 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 SORCS1Q8WY21 1168 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 CNOT9Q92600 299 aaKnown RBP4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 SNAPC3Q92966 411 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 USP13Q92995 863 aaPredicted RBP4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 CD101Q93033 1021 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 CCDC47Q96A33 483 aaKnown RBP4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 SYAP1Q96A49 352 aaPredicted RBP4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 OTULINQ96BN8 352 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 OTUB2Q96DC9 234 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 LRRC3BQ96PB8 259 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 SYT15Q9BQS2 421 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 CBWD1Q9BRT8 395 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 PI4K2AQ9BTU6 479 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 TRIM9Q9C026 710 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 ECT2Q9H8V3 914 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 DUS2Q9NX74 493 aaKnown RBP4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 MALT1Q9UDY8 824 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 GTF3C4Q9UKN8 822 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 ARHGAP26Q9UNA1 814 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 ZFHX3Q15911 3703 aa4.14□□□□□ -1.75
GTF3C3-207ENST00000451088 PLXND1Q9Y4D7 1925 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 PVALEFA0A1B0GWK0 134 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 ARHGAP10A1A4S6 786 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 GOLGA8IPA6NC78 632 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 SH2D7A6NKC9 451 aaPredicted RBP4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 GOLGA8JA6NMD2 632 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 A8MXQ7 604 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 PRAC2D3DTV9 90 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 E9PAM4 449 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 PLK4O00444 970 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 HSPA12AO43301 675 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 EGFP01133 1207 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 RPN1P04843 607 aaKnown RBP4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 DLATP10515 647 aaKnown RBP4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 TFPIP10646 304 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 HLA-EP13747 358 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 ZNF8P17098 575 aaPredicted RBP4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 ITGAXP20702 1163 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 WARSP23381 471 aaKnown RBP4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 ACAT1P24752 427 aaKnown RBP4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 TUBP50607 506 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 ARL4CP56559 192 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 GSCP56915 257 aaPredicted RBP4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 CYP24A1Q07973 514 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 DMC1Q14565 340 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 PSMD6Q15008 389 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 TAF5Q15542 800 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 ZNF77Q15935 545 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 SOWAHAQ2M3V2 549 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 SPDYCQ5MJ68 293 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 FAM171BQ6P995 826 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 SHFQ7M4L6 423 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 RABEPKQ7Z6M1 372 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 TADA2BQ86TJ2 420 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 EXOC3L1Q86VI1 746 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 NAXDQ8IW45 347 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 C12orf56Q8IXR9 622 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 TTC39CQ8N584 583 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 FRMD1Q8N878 549 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 POC1AQ8NBT0 407 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 TSTD1Q8NFU3 115 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 SPATA20Q8TB22 786 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 LRRC15Q8TF66 581 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 RLN3Q8WXF3 142 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 TAF4BQ92750 862 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 FGF11Q92914 225 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 TBC1D20Q96BZ9 403 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 DHX58Q96C10 678 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 TWNKQ96RR1 684 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 USP28Q96RU2 1077 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 NODALQ96S42 347 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 NACA2Q9H009 215 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 FBXO44Q9H4M3 255 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 SUDS3Q9H7L9 328 aaPredicted RBP4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 AGPAT3Q9NRZ7 376 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 CYSLTR2Q9NS75 346 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 EXOC1Q9NV70 894 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 COMMD8Q9NX08 183 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 SMARCAL1Q9NZC9 954 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 SLCO3A1Q9UIG8 710 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 SIX4Q9UIU6 781 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 MTMR6Q9Y217 621 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 PCDHGB5Q9Y5G0 923 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 ATP6V1DQ9Y5K8 247 aa4.13□□□□□ -1.75
GTF3C3-207ENST00000451088 CCDC189A1A4V9 331 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms