RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 SSU72Q9NP77 194 aaKnown RBP13.77□□□□□ -0.21
CSTF3-202ENST00000431742 COPG2Q9UBF2 871 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 PCTPQ9UKL6 214 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 PCDHB3Q9Y5E6 796 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 ACTL7BQ9Y614 415 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 MAP1BP46821 2468 aaKnown RBP13.76□□□□□ -0.21
CSTF3-202ENST00000431742 ZFHX4Q86UP3 3567 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 UQCRHLA0A096LP55 91 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 LOC105369274A0A096LPK9 316 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 LOC102723532A0A0G2JNH3 316 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 TRBC2A0A5B9 178 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 FITM1A5D6W6 292 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 H0YGG7 62 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 TLX3O43711 291 aaPredicted RBP13.76□□□□□ -0.21
CSTF3-202ENST00000431742 SPAG7O75391 227 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 OR2B3O76000 313 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 UQCRHP07919 91 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 MYZAPP0CAP1 466 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 C1GALT1C1LP0DN25 315 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 EPB42P16452 691 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 ZNF28P17035 718 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 VARSP26640 1264 aaKnown RBP13.76□□□□□ -0.21
CSTF3-202ENST00000431742 BCL6P41182 706 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 CASP2P42575 452 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 PIK3CGP48736 1102 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 ARF3P61204 181 aaPredicted RBP13.76□□□□□ -0.21
CSTF3-202ENST00000431742 RPS15AP62244 130 aaKnown RBP13.76□□□□□ -0.21
CSTF3-202ENST00000431742 HERVK_113P63132 956 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 MEF2AQ02078 507 aaPredicted RBP13.76□□□□□ -0.21
CSTF3-202ENST00000431742 TBCCQ15814 346 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 TCTE1Q5JU00 501 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 HDXQ7Z353 690 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 VN1R4Q7Z5H5 301 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 OR4N4Q8N0Y3 316 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 TEX9Q8N6V9 391 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 ZNF740Q8NDX6 193 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 ZNF483Q8TF39 744 aaPredicted RBP13.76□□□□□ -0.21
CSTF3-202ENST00000431742 ZBTB9Q96C00 473 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 THAP11Q96EK4 314 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 L3HYPDHQ96EM0 354 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 TMEM237Q96Q45 408 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 PHF12Q96QT6 1004 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 ERVK-6Q9BXR3 956 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 SPRTNQ9H040 489 aaPredicted RBP13.76□□□□□ -0.21
CSTF3-202ENST00000431742 CENPHQ9H3R5 247 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 TMBIM4Q9HC24 238 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 GEMIN8Q9NWZ8 242 aaKnown RBP13.76□□□□□ -0.21
CSTF3-202ENST00000431742 SERTAD3Q9UJW9 196 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 PCDHGA4Q9Y5G9 962 aa13.76□□□□□ -0.21
CSTF3-202ENST00000431742 TPRP12270 2363 aaKnown RBP13.76□□□□□ -0.21
CSTF3-202ENST00000431742 DMXL2Q8TDJ6 3036 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 FEZF1A0PJY2 475 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 CLGNO14967 610 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 ZSCAN9O15535 394 aaPredicted RBP13.75□□□□□ -0.21
CSTF3-202ENST00000431742 P2RX6O15547 441 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 LCMT2O60294 686 aaKnown RBP13.75□□□□□ -0.21
CSTF3-202ENST00000431742 SCRG1O75711 98 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 WFS1O76024 890 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 STK17BO94768 372 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 MYL2P10916 166 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 CD22P20273 847 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 GRK3P35626 688 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 SCTRP47872 440 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 PRKAA2P54646 552 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 VSX2P58304 361 aaPredicted RBP13.75□□□□□ -0.21
CSTF3-202ENST00000431742 GTF2H2Q13888 395 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 MAP7Q14244 749 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 PCLAFQ15004 111 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 PRTGQ2VWP7 1150 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 PRAMEF17Q5VTA0 474 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 GTF2H2CQ6P1K8 395 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 TLDC1Q6P9B6 456 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 GOLGA7Q7Z5G4 137 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 DTX1Q86Y01 620 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 TMEM126BQ8IUX1 230 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 SLC22A9Q8IVM8 553 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 GPR135Q8IZ08 494 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 ARHGEF39Q8N4T4 335 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 MFSD9Q8NBP5 474 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 TCP10LQ8TDR4 215 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 N4BP2L2Q92802 583 aaPredicted RBP13.75□□□□□ -0.21
CSTF3-202ENST00000431742 FGF11Q92914 225 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 TLCD1Q96CP7 247 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 TM4SF19Q96DZ7 209 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 CCDC126Q96EE4 140 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 DCBLD2Q96PD2 775 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 RUFY1Q96T51 708 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 AIF1LQ9BQI0 150 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 ULBP3Q9BZM4 244 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 PITHD1Q9GZP4 211 aaPredicted RBP13.75□□□□□ -0.21
CSTF3-202ENST00000431742 IQCGQ9H095 443 aaKnown RBP13.75□□□□□ -0.21
CSTF3-202ENST00000431742 STMN4Q9H169 189 aaPredicted RBP13.75□□□□□ -0.21
CSTF3-202ENST00000431742 ZBTB26Q9HCK0 441 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 SLC17A7Q9P2U7 560 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 AP1M2Q9Y6Q5 423 aa13.75□□□□□ -0.21
CSTF3-202ENST00000431742 CCDC88CQ9P219 2028 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 TMEM8BA6NDV4 472 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 STMND1H3BQB6 276 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 OR7A17O14581 309 aa13.74□□□□□ -0.21
CSTF3-202ENST00000431742 ZNF749O43361 778 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms