RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 FCRL5Q96RD9 977 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 BOCQ9BWV1 1114 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 PPIL3Q9H2H8 161 aaKnown RBP8.57□□□□□ -1.04
RTN4-206ENST00000394611 CARS2Q9HA77 564 aaKnown RBP8.57□□□□□ -1.04
RTN4-206ENST00000394611 MIEF1Q9NQG6 463 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 GKN1Q9NS71 199 aa8.57□□□□□ -1.04
RTN4-206ENST00000394611 CNOT11Q9UKZ1 510 aaKnown RBP8.57□□□□□ -1.04
RTN4-206ENST00000394611 PPIEQ9UNP9 301 aaKnown RBP8.57□□□□□ -1.04
RTN4-206ENST00000394611 A0A0C4DFX4 3053 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 A0A1W2PQ09 198 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 HAT1O14929 419 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 TEX28O15482 410 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 SMIM10L2AP0DMW4 78 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 SMIM10L2BP0DMW5 78 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 MYL9P24844 172 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 PGFP49763 221 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 SCN1BQ07699 218 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 NKG7Q16617 165 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 LEXMQ3ZCV2 418 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 CTXN3Q4LDR2 81 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 SMARCD3Q6STE5 483 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 LAX1Q8IWV1 398 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 RGL4Q8IZJ4 473 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 IQCF1Q8N6M8 205 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 ATP6V0D2Q8N8Y2 350 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 ARRDC4Q8NCT1 418 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 OR10G2Q8NGC3 310 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 ASB12Q8WXK4 309 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 C16orf70Q9BSU1 422 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 SLC25A51Q9H1U9 297 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 SDR39U1Q9NRG7 319 aaPredicted RBP8.56□□□□□ -1.04
RTN4-206ENST00000394611 AIG1Q9NVV5 245 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 EIF3KQ9UBQ5 218 aaKnown RBP8.56□□□□□ -1.04
RTN4-206ENST00000394611 SSR3Q9UNL2 185 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 IFT52Q9Y366 437 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 IGKV6D-21A0A0A0MT36 114 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 SLC22A2O15244 555 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 OR2B3O76000 313 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 PRAMEF1O95521 474 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 HSD17B1P14061 328 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 RPL17P18621 184 aaKnown RBP8.56□□□□□ -1.04
RTN4-206ENST00000394611 MYL12AP19105 171 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 CCNCP24863 283 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 LEPRP48357 1165 aaKnown RBP8.56□□□□□ -1.04
RTN4-206ENST00000394611 LHX1P48742 406 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 CRISP3P54108 245 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 MEF2AQ02078 507 aaPredicted RBP8.56□□□□□ -1.04
RTN4-206ENST00000394611 RPA4Q13156 261 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 KCNA10Q16322 511 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 PLEKHG6Q3KR16 790 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 FAM171A1Q5VUB5 890 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 FAAH2Q6GMR7 532 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 C11orf88Q6PI97 169 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 NKAPQ8N5F7 415 aaKnown RBP8.56□□□□□ -1.04
RTN4-206ENST00000394611 HMGB4Q8WW32 186 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 RDH12Q96NR8 316 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 SERHL2Q9H4I8 314 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 SERHLQ9NQF3 203 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 TMEM30AQ9NV96 361 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 SCN1AP35498 2009 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 KIAA0100Q14667 2235 aaKnown RBP8.56□□□□□ -1.04
RTN4-206ENST00000394611 LOC102723532A0A0G2JNH3 316 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 MAFKO60675 156 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 JRKO75564 520 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 CD52P31358 61 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 CPT1AP50416 773 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 MLLT1Q03111 559 aaPredicted RBP8.56□□□□□ -1.04
RTN4-206ENST00000394611 FCHO2Q0JRZ9 810 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 TAF10Q12962 218 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 SUZ12Q15022 739 aaKnown RBP8.56□□□□□ -1.04
RTN4-206ENST00000394611 KLHL12Q53G59 568 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 TRIM40Q6P9F5 258 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 RASSF6Q6ZTQ3 369 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 LRRC52Q8N7C0 313 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 SLC37A3Q8NCC5 494 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 GANCQ8TET4 914 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 DOK4Q8TEW6 326 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 PYURFQ96I23 114 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 AARSD1Q9BTE6 412 aaKnown RBP8.56□□□□□ -1.04
RTN4-206ENST00000394611 DPCDQ9BVM2 203 aaPredicted RBP8.56□□□□□ -1.04
RTN4-206ENST00000394611 EQTNQ9NQ60 294 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 PAK6Q9NQU5 681 aaPredicted RBP8.56□□□□□ -1.04
RTN4-206ENST00000394611 Q9Y3F1 56 aa8.56□□□□□ -1.04
RTN4-206ENST00000394611 NRCAMQ92823 1304 aa8.55□□□□□ -1.04
RTN4-206ENST00000394611 M0QX08 132 aa8.55□□□□□ -1.04
RTN4-206ENST00000394611 VPS4BO75351 444 aa8.55□□□□□ -1.04
RTN4-206ENST00000394611 ASGR1P07306 291 aa8.55□□□□□ -1.04
RTN4-206ENST00000394611 YES1P07947 543 aa8.55□□□□□ -1.04
RTN4-206ENST00000394611 LPOP22079 712 aaPredicted RBP8.55□□□□□ -1.04
RTN4-206ENST00000394611 TACR1P25103 407 aa8.55□□□□□ -1.04
RTN4-206ENST00000394611 ZNF81P51508 661 aa8.55□□□□□ -1.04
RTN4-206ENST00000394611 ARHGDIBP52566 201 aa8.55□□□□□ -1.04
RTN4-206ENST00000394611 DCDC1P59894 354 aa8.55□□□□□ -1.04
RTN4-206ENST00000394611 CARD16Q5EG05 197 aa8.55□□□□□ -1.04
RTN4-206ENST00000394611 PRSS36Q5K4E3 855 aa8.55□□□□□ -1.04
RTN4-206ENST00000394611 IZUMO1Q8IYV9 350 aa8.55□□□□□ -1.04
RTN4-206ENST00000394611 PELI3Q8N2H9 469 aa8.55□□□□□ -1.04
RTN4-206ENST00000394611 TTC9BQ8N6N2 239 aa8.55□□□□□ -1.04
RTN4-206ENST00000394611 OR4A15Q8NGL6 344 aa8.55□□□□□ -1.04
RTN4-206ENST00000394611 RHOXF1Q8NHV9 184 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms