RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 SCAMP4Q969E2 229 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 BIRC7Q96CA5 298 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 PYURFQ96I23 114 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 RANBP9Q96S59 729 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 FAM120CQ9NX05 1096 aaKnown RBP16.73■□□□□ 0.27
CDCP1-201ENST00000296129 RPL36Q9Y3U8 105 aaKnown RBP16.73■□□□□ 0.27
CDCP1-201ENST00000296129 RBM7Q9Y580 266 aaKnown RBP16.73■□□□□ 0.27
CDCP1-201ENST00000296129 SETD1AO15047 1707 aaKnown RBP16.73■□□□□ 0.27
CDCP1-201ENST00000296129 AZGP1P25311 298 aaKnown RBP16.73■□□□□ 0.27
CDCP1-201ENST00000296129 TGFBR2P37173 567 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 NPAS3Q8IXF0 933 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 ZNF483Q8TF39 744 aaPredicted RBP16.73■□□□□ 0.27
CDCP1-201ENST00000296129 DSN1Q9H410 356 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 CD320Q9NPF0 282 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 ING3Q9NXR8 418 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 LDB2O43679 373 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 GSRP00390 522 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 PGGT1BP53609 377 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 MYBPC3Q14896 1274 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 SIX1Q15475 284 aaPredicted RBP16.73■□□□□ 0.27
CDCP1-201ENST00000296129 MORN1Q5T089 497 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 DPY19L3Q6ZPD9 716 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 ARMCX6Q7L4S7 300 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 TRPV1Q8NER1 839 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 HSH2DQ96JZ2 352 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 AMBNQ9NP70 447 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 TMLHEQ9NVH6 421 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 CREG1O75629 220 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 GLDCP23378 1020 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 RBM48Q5RL73 367 aaKnown RBP16.73■□□□□ 0.27
CDCP1-201ENST00000296129 NUP54Q7Z3B4 507 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 TP53INP2Q8IXH6 220 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 NPWQ8N729 165 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 ERVK-11Q9UQG0 969 aa16.73■□□□□ 0.27
CDCP1-201ENST00000296129 TLR4O00206 839 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 KIAA1161Q6NSJ0 714 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 COMMD4Q9H0A8 199 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 TPT1P8Q9HAU6 139 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 FAM240BA0A1B0GVZ2 78 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 DAPL1A0PJW8 107 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 AGR2O95994 175 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 ATP4BP51164 291 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 ITPRIPL2Q3MIP1 535 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 PACRGLQ8N7B6 248 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 FCGR1BQ92637 280 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 TRPV5Q9NQA5 729 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 BTN3A3O00478 584 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 S1PR4O95977 384 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 H1F0P07305 194 aaKnown RBP16.72■□□□□ 0.27
CDCP1-201ENST00000296129 GNALP38405 381 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 RPS6KA3P51812 740 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 LMX1AQ8TE12 382 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 OTUB2Q96DC9 234 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 SGIP1Q9BQI5 828 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 RIMKLBQ9ULI2 386 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 ATP5A1P25705 553 aaKnown RBP16.72■□□□□ 0.27
CDCP1-201ENST00000296129 CDKN2DP55273 166 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 BICRALQ6AI39 1079 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 ERN2Q76MJ5 926 aaKnown RBP16.72■□□□□ 0.27
CDCP1-201ENST00000296129 OR6K6Q8NGW6 343 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 SMPDL3BQ92485 455 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 SEC14L1Q92503 715 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 HCN3Q9P1Z3 774 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 OARD1Q9Y530 152 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 TSPAN6O43657 245 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 DIRAS1O95057 198 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 HYAL2Q12891 473 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 TIGD6Q17RP2 521 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 USP43Q70EL4 1123 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 TICAM1Q8IUC6 712 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 PJA1Q8NG27 643 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 SLC25A36Q96CQ1 311 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 ZNF382Q96SR6 550 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 POFUT2Q9Y2G5 429 aa16.72■□□□□ 0.27
CDCP1-201ENST00000296129 DNAJC25-GNG10A0A024R161 153 aa16.71■□□□□ 0.27
CDCP1-201ENST00000296129 A8MU76 341 aa16.71■□□□□ 0.27
CDCP1-201ENST00000296129 TOR1BO14657 336 aa16.71■□□□□ 0.27
CDCP1-201ENST00000296129 MPP2Q14168 576 aa16.71■□□□□ 0.27
CDCP1-201ENST00000296129 CMTR2Q8IYT2 770 aaKnown RBP16.71■□□□□ 0.27
CDCP1-201ENST00000296129 CCDC106Q9BWC9 280 aa16.71■□□□□ 0.27
CDCP1-201ENST00000296129 PEX16Q9Y5Y5 336 aa16.71■□□□□ 0.27
CDCP1-201ENST00000296129 ZNF823P16415 610 aa16.71■□□□□ 0.27
CDCP1-201ENST00000296129 NRG3P56975 720 aa16.71■□□□□ 0.27
CDCP1-201ENST00000296129 C12orf76Q8N812 135 aaPredicted RBP16.71■□□□□ 0.27
CDCP1-201ENST00000296129 RAB2BQ8WUD1 216 aa16.71■□□□□ 0.27
CDCP1-201ENST00000296129 MOCOSQ96EN8 888 aa16.71■□□□□ 0.27
CDCP1-201ENST00000296129 PLEKHA1Q9HB21 404 aa16.71■□□□□ 0.27
CDCP1-201ENST00000296129 MOCS1Q9NZB8 636 aa16.71■□□□□ 0.27
CDCP1-201ENST00000296129 MARCH4Q9P2E8 410 aaPredicted RBP16.71■□□□□ 0.27
CDCP1-201ENST00000296129 TIAM2Q8IVF5 1701 aa16.71■□□□□ 0.27
CDCP1-201ENST00000296129 REM1O75628 298 aa16.71■□□□□ 0.27
CDCP1-201ENST00000296129 NPTX1Q15818 432 aa16.71■□□□□ 0.27
CDCP1-201ENST00000296129 PRRT3Q5FWE3 981 aa16.71■□□□□ 0.27
CDCP1-201ENST00000296129 PSAPL1Q6NUJ1 521 aa16.71■□□□□ 0.27
CDCP1-201ENST00000296129 PLET1Q6UQ28 207 aa16.71■□□□□ 0.27
CDCP1-201ENST00000296129 TRAM1L1Q8N609 369 aa16.71■□□□□ 0.27
CDCP1-201ENST00000296129 MEIOBQ8N635 442 aa16.71■□□□□ 0.27
CDCP1-201ENST00000296129 RETREG1Q9H6L5 497 aa16.71■□□□□ 0.27
CDCP1-201ENST00000296129 SNTG1Q9NSN8 517 aa16.71■□□□□ 0.27
CDCP1-201ENST00000296129 SAGE2PA6NJ88 616 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms