RNA–Protein interactions for RNA: ENST00000576921.1

HCFC1R1-209, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best)

Gene HCFC1R1, Length 1,199 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-209ENST00000576921 HIST1H2AGP0C0S8 130 aaPredicted RBP20.17■□□□□ 0.82
HCFC1R1-209ENST00000576921 HIST1H2ADP20671 130 aa20.17■□□□□ 0.82
HCFC1R1-209ENST00000576921 NKG7Q16617 165 aa20.17■□□□□ 0.82
HCFC1R1-209ENST00000576921 AGTRAPQ6RW13 159 aa20.17■□□□□ 0.82
HCFC1R1-209ENST00000576921 PPP1R32Q7Z5V6 425 aa20.17■□□□□ 0.82
HCFC1R1-209ENST00000576921 FDCSPQ8NFU4 85 aa20.17■□□□□ 0.82
HCFC1R1-209ENST00000576921 PYROXD1Q8WU10 500 aa20.17■□□□□ 0.82
HCFC1R1-209ENST00000576921 HIST1H2AHQ96KK5 128 aa20.17■□□□□ 0.82
HCFC1R1-209ENST00000576921 PRAP1Q96NZ9 151 aa20.17■□□□□ 0.82
HCFC1R1-209ENST00000576921 HIST1H2AJQ99878 128 aa20.17■□□□□ 0.82
HCFC1R1-209ENST00000576921 H2AFJQ9BTM1 129 aa20.17■□□□□ 0.82
HCFC1R1-209ENST00000576921 WDR54Q9H977 334 aa20.17■□□□□ 0.82
HCFC1R1-209ENST00000576921 ZNF304Q9HCX3 659 aa20.17■□□□□ 0.82
HCFC1R1-209ENST00000576921 SAYSD1Q9NPB0 183 aa20.17■□□□□ 0.82
HCFC1R1-209ENST00000576921 P4HTMQ9NXG6 502 aa20.17■□□□□ 0.82
HCFC1R1-209ENST00000576921 CDC23Q9UJX2 597 aa20.17■□□□□ 0.82
HCFC1R1-209ENST00000576921 RUVBL1Q9Y265 456 aaKnown RBP20.17■□□□□ 0.82
HCFC1R1-209ENST00000576921 UBR5O95071 2799 aaPredicted RBP20.16■□□□□ 0.82
HCFC1R1-209ENST00000576921 FAM95CA0A1B0GW59 222 aa20.16■□□□□ 0.82
HCFC1R1-209ENST00000576921 ALBP02768 609 aa20.16■□□□□ 0.82
HCFC1R1-209ENST00000576921 STATHP02808 62 aa20.16■□□□□ 0.82
HCFC1R1-209ENST00000576921 FBLP22087 321 aaKnown RBP20.16■□□□□ 0.82
HCFC1R1-209ENST00000576921 NAE1Q13564 534 aa20.16■□□□□ 0.82
HCFC1R1-209ENST00000576921 PRTGQ2VWP7 1150 aa20.16■□□□□ 0.82
HCFC1R1-209ENST00000576921 PRMT9Q6P2P2 845 aa20.16■□□□□ 0.82
HCFC1R1-209ENST00000576921 PRSS58Q8IYP2 241 aa20.16■□□□□ 0.82
HCFC1R1-209ENST00000576921 CLEC1AQ8NC01 280 aa20.16■□□□□ 0.82
HCFC1R1-209ENST00000576921 FER1L6-AS2Q96M78 137 aa20.16■□□□□ 0.82
HCFC1R1-209ENST00000576921 OR2A5Q96R48 311 aa20.16■□□□□ 0.82
HCFC1R1-209ENST00000576921 SPSB2Q99619 263 aa20.16■□□□□ 0.82
HCFC1R1-209ENST00000576921 NUDT9Q9BW91 350 aa20.16■□□□□ 0.82
HCFC1R1-209ENST00000576921 SLC26A1Q9H2B4 701 aa20.16■□□□□ 0.82
HCFC1R1-209ENST00000576921 ARL15Q9NXU5 204 aa20.16■□□□□ 0.82
HCFC1R1-209ENST00000576921 GPR83Q9NYM4 423 aa20.16■□□□□ 0.82
HCFC1R1-209ENST00000576921 SH2B3Q9UQQ2 575 aa20.16■□□□□ 0.82
HCFC1R1-209ENST00000576921 SPENQ96T58 3664 aaKnown RBP20.15■□□□□ 0.82
HCFC1R1-209ENST00000576921 MASP2O00187 686 aa20.15■□□□□ 0.82
HCFC1R1-209ENST00000576921 CEACAM4O75871 244 aa20.15■□□□□ 0.82
HCFC1R1-209ENST00000576921 PIAS1O75925 651 aa20.15■□□□□ 0.82
HCFC1R1-209ENST00000576921 ONECUT2O95948 504 aa20.15■□□□□ 0.82
HCFC1R1-209ENST00000576921 KCNC4Q03721 635 aa20.15■□□□□ 0.82
HCFC1R1-209ENST00000576921 ZNF460Q14592 562 aa20.15■□□□□ 0.82
HCFC1R1-209ENST00000576921 DCAF10Q5QP82 559 aa20.15■□□□□ 0.82
HCFC1R1-209ENST00000576921 SLC26A11Q86WA9 606 aa20.15■□□□□ 0.82
HCFC1R1-209ENST00000576921 ZC3HC1Q86WB0 502 aaKnown RBP20.15■□□□□ 0.82
HCFC1R1-209ENST00000576921 YIPF2Q9BWQ6 316 aa20.15■□□□□ 0.82
HCFC1R1-209ENST00000576921 TRIM54Q9BYV2 358 aa20.15■□□□□ 0.82
HCFC1R1-209ENST00000576921 PCBD2Q9H0N5 130 aa20.15■□□□□ 0.82
HCFC1R1-209ENST00000576921 CLMPQ9H6B4 373 aa20.15■□□□□ 0.82
HCFC1R1-209ENST00000576921 NSMCE4AQ9NXX6 385 aa20.15■□□□□ 0.82
HCFC1R1-209ENST00000576921 MOCS1Q9NZB8 636 aa20.15■□□□□ 0.82
HCFC1R1-209ENST00000576921 GRHL1Q9NZI5 618 aa20.15■□□□□ 0.82
HCFC1R1-209ENST00000576921 NXT1Q9UKK6 140 aaKnown RBP20.15■□□□□ 0.82
HCFC1R1-209ENST00000576921 UTP11Q9Y3A2 253 aaKnown RBP20.15■□□□□ 0.82
HCFC1R1-209ENST00000576921 ZNF451Q9Y4E5 1061 aa20.15■□□□□ 0.82
HCFC1R1-209ENST00000576921 P2RX6O15547 441 aa20.14■□□□□ 0.81
HCFC1R1-209ENST00000576921 IGHEP01854 428 aa20.14■□□□□ 0.81
HCFC1R1-209ENST00000576921 SSTR1P30872 391 aa20.14■□□□□ 0.81
HCFC1R1-209ENST00000576921 CSRP3P50461 194 aa20.14■□□□□ 0.81
HCFC1R1-209ENST00000576921 OCA2Q04671 838 aa20.14■□□□□ 0.81
HCFC1R1-209ENST00000576921 DUPD1Q68J44 220 aa20.14■□□□□ 0.81
HCFC1R1-209ENST00000576921 C17orf64Q86WR6 236 aa20.14■□□□□ 0.81
HCFC1R1-209ENST00000576921 C16orf45Q96MC5 204 aaPredicted RBP20.14■□□□□ 0.81
HCFC1R1-209ENST00000576921 RAB17Q9H0T7 212 aa20.14■□□□□ 0.81
HCFC1R1-209ENST00000576921 MLXIPLQ9NP71 852 aa20.14■□□□□ 0.81
HCFC1R1-209ENST00000576921 TMEM184CQ9NVA4 438 aa20.14■□□□□ 0.81
HCFC1R1-209ENST00000576921 ZNF282Q9UDV7 671 aaPredicted RBP20.14■□□□□ 0.81
HCFC1R1-209ENST00000576921 FBXL4Q9UKA2 621 aa20.14■□□□□ 0.81
HCFC1R1-209ENST00000576921 AGPSO00116 658 aa20.13■□□□□ 0.81
HCFC1R1-209ENST00000576921 FFAR3O14843 346 aa20.13■□□□□ 0.81
HCFC1R1-209ENST00000576921 GPR42O15529 346 aa20.13■□□□□ 0.81
HCFC1R1-209ENST00000576921 ALOX12BO75342 701 aa20.13■□□□□ 0.81
HCFC1R1-209ENST00000576921 GUCA1CO95843 209 aa20.13■□□□□ 0.81
HCFC1R1-209ENST00000576921 ZNF37AP17032 561 aaPredicted RBP20.13■□□□□ 0.81
HCFC1R1-209ENST00000576921 MMP11P24347 488 aa20.13■□□□□ 0.81
HCFC1R1-209ENST00000576921 CCND1P24385 295 aa20.13■□□□□ 0.81
HCFC1R1-209ENST00000576921 PLTPP55058 493 aa20.13■□□□□ 0.81
HCFC1R1-209ENST00000576921 AP1S2P56377 157 aa20.13■□□□□ 0.81
HCFC1R1-209ENST00000576921 RBBP7Q16576 425 aa20.13■□□□□ 0.81
HCFC1R1-209ENST00000576921 CAPN13Q6MZZ7 669 aaPredicted RBP20.13■□□□□ 0.81
HCFC1R1-209ENST00000576921 CCDC25Q86WR0 208 aa20.13■□□□□ 0.81
HCFC1R1-209ENST00000576921 GALNT16Q8N428 558 aa20.13■□□□□ 0.81
HCFC1R1-209ENST00000576921 STT3BQ8TCJ2 826 aa20.13■□□□□ 0.81
HCFC1R1-209ENST00000576921 MIEF2Q96C03 454 aa20.13■□□□□ 0.81
HCFC1R1-209ENST00000576921 PYCR2Q96C36 320 aa20.13■□□□□ 0.81
HCFC1R1-209ENST00000576921 CRB3Q9BUF7 120 aa20.13■□□□□ 0.81
HCFC1R1-209ENST00000576921 SMYD2Q9NRG4 433 aa20.13■□□□□ 0.81
HCFC1R1-209ENST00000576921 CDC14AQ9UNH5 594 aa20.13■□□□□ 0.81
HCFC1R1-209ENST00000576921 DOCK10Q96BY6 2186 aa20.12■□□□□ 0.81
HCFC1R1-209ENST00000576921 NBASA2RRP1 2371 aa20.12■□□□□ 0.81
HCFC1R1-209ENST00000576921 NPEPPSL1A6NEC2 478 aa20.12■□□□□ 0.81
HCFC1R1-209ENST00000576921 TXNDC9O14530 226 aa20.12■□□□□ 0.81
HCFC1R1-209ENST00000576921 EIF3HO15372 352 aaKnown RBP eCLIP20.12■□□□□ 0.81
HCFC1R1-209ENST00000576921 PRPF4O43172 522 aaKnown RBP eCLIP20.12■□□□□ 0.81
HCFC1R1-209ENST00000576921 ANXA5P08758 320 aa20.12■□□□□ 0.81
HCFC1R1-209ENST00000576921 CDH1P12830 882 aa20.12■□□□□ 0.81
HCFC1R1-209ENST00000576921 HRH2P25021 359 aa20.12■□□□□ 0.81
HCFC1R1-209ENST00000576921 EMP3P54852 163 aa20.12■□□□□ 0.81
HCFC1R1-209ENST00000576921 TAS2R39P59534 338 aa20.12■□□□□ 0.81
HCFC1R1-209ENST00000576921 RPS15AP62244 130 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms