RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 LINGO1Q96FE5 620 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 SPSB2Q99619 263 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 SLC30A3Q99726 388 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 STOX2Q9P2F5 926 aaPredicted RBP15.97■□□□□ 0.15
USB1-211ENST00000565662 TXNDC16Q9P2K2 825 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 GALPQ9UBC7 116 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 VWA7Q9Y334 891 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 UTP11Q9Y3A2 253 aaKnown RBP15.97■□□□□ 0.15
USB1-211ENST00000565662 MAP4K5Q9Y4K4 846 aa15.97■□□□□ 0.15
USB1-211ENST00000565662 H0YGG7 62 aa15.96■□□□□ 0.15
USB1-211ENST00000565662 H0YIG0 161 aa15.96■□□□□ 0.15
USB1-211ENST00000565662 MAP2K7O14733 419 aa15.96■□□□□ 0.15
USB1-211ENST00000565662 SLC35G6P0C7Q6 338 aa15.96■□□□□ 0.15
USB1-211ENST00000565662 CASQ1P31415 396 aa15.96■□□□□ 0.15
USB1-211ENST00000565662 ARF3P61204 181 aaPredicted RBP15.96■□□□□ 0.15
USB1-211ENST00000565662 SLC9A5Q14940 896 aa15.96■□□□□ 0.15
USB1-211ENST00000565662 FRMPD2BQ6IN97 320 aa15.96■□□□□ 0.15
USB1-211ENST00000565662 CAMKVQ8NCB2 501 aa15.96■□□□□ 0.15
USB1-211ENST00000565662 EEF1AKMT1Q8WVE0 214 aa15.96■□□□□ 0.15
USB1-211ENST00000565662 CFAP36Q96G28 342 aa15.96■□□□□ 0.15
USB1-211ENST00000565662 OR2A5Q96R48 311 aa15.96■□□□□ 0.15
USB1-211ENST00000565662 NDNQ99608 321 aa15.96■□□□□ 0.15
USB1-211ENST00000565662 CRB3Q9BUF7 120 aa15.96■□□□□ 0.15
USB1-211ENST00000565662 TRIM4Q9C037 500 aa15.96■□□□□ 0.15
USB1-211ENST00000565662 TGIF2Q9GZN2 237 aa15.96■□□□□ 0.15
USB1-211ENST00000565662 SLAMF7Q9NQ25 335 aa15.96■□□□□ 0.15
USB1-211ENST00000565662 ARL15Q9NXU5 204 aa15.96■□□□□ 0.15
USB1-211ENST00000565662 TTLL8A6PVC2 850 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 VPS4BO75351 444 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 UMODP07911 640 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 CXCR2P25025 360 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 HNMTP50135 292 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 SLC12A2P55011 1212 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 CKAP4Q07065 602 aaKnown RBP15.95■□□□□ 0.14
USB1-211ENST00000565662 PDIA2Q13087 525 aaKnown RBP15.95■□□□□ 0.14
USB1-211ENST00000565662 CHAF1BQ13112 559 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 MSS51Q4VC12 460 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 HECTD2Q5U5R9 776 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 FBXO42Q6P3S6 717 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 AGTRAPQ6RW13 159 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 PAQR3Q6TCH7 311 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 CEP128Q6ZU80 1094 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 CYS1Q717R9 158 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 COX15Q7KZN9 410 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 PPP1R32Q7Z5V6 425 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 ADAMTSL2Q86TH1 951 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 LRRC56Q8IYG6 542 aaPredicted RBP15.95■□□□□ 0.14
USB1-211ENST00000565662 ZADH2Q8N4Q0 377 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 FBXO36Q8NEA4 188 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 STT3BQ8TCJ2 826 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 PYROXD1Q8WU10 500 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 TSPAN17Q96FV3 270 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 KRT12Q99456 494 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 ERP44Q9BS26 406 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 EPS8L2Q9H6S3 715 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 SLC22A11Q9NSA0 550 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 VPS4AQ9UN37 437 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 PDE10AQ9Y233 779 aa15.95■□□□□ 0.14
USB1-211ENST00000565662 MDC1Q14676 2089 aaKnown RBP15.95■□□□□ 0.14
USB1-211ENST00000565662 A0A1W2PQ72 361 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 HPP00738 406 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 ZGLP1P0C6A0 271 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 ICAM2P13598 275 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 ACPPP15309 386 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 ZNF37AP17032 561 aaPredicted RBP15.94■□□□□ 0.14
USB1-211ENST00000565662 IL10P22301 178 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 ETF1P62495 437 aaKnown RBP15.94■□□□□ 0.14
USB1-211ENST00000565662 CDKL1Q00532 357 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 STRA8Q7Z7C7 330 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 ZBED8Q8IZ13 594 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 IQCKQ8N0W5 287 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 GALNT11Q8NCW6 608 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 SPATA4Q8NEY3 305 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 MIB2Q96AX9 1013 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 FBXL8Q96CD0 374 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 C10orf90Q96M02 699 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 TRIM51Q9BSJ1 452 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 SARGQ9BW04 601 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 NUDT9Q9BW91 350 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 SGPP1Q9BX95 441 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 RHOJQ9H4E5 214 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 RIC8BQ9NVN3 520 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 MOCS1Q9NZB8 636 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 C19orf25Q9UFG5 118 aaPredicted RBP15.94■□□□□ 0.14
USB1-211ENST00000565662 PYCARDQ9ULZ3 195 aa15.94■□□□□ 0.14
USB1-211ENST00000565662 RUVBL1Q9Y265 456 aaKnown RBP15.94■□□□□ 0.14
USB1-211ENST00000565662 LOC105369274A0A096LPK9 316 aa15.93■□□□□ 0.14
USB1-211ENST00000565662 IGKV1-8A0A0C4DH67 115 aa15.93■□□□□ 0.14
USB1-211ENST00000565662 LOC102723532A0A0G2JNH3 316 aa15.93■□□□□ 0.14
USB1-211ENST00000565662 URADA6NGE7 173 aa15.93■□□□□ 0.14
USB1-211ENST00000565662 SORBS2O94875 1100 aaKnown RBP15.93■□□□□ 0.14
USB1-211ENST00000565662 NSA2O95478 260 aaKnown RBP15.93■□□□□ 0.14
USB1-211ENST00000565662 ITGA3P26006 1051 aa15.93■□□□□ 0.14
USB1-211ENST00000565662 GSTM2P28161 218 aa15.93■□□□□ 0.14
USB1-211ENST00000565662 HPDP32754 393 aaPredicted RBP15.93■□□□□ 0.14
USB1-211ENST00000565662 SLC26A3P40879 764 aa15.93■□□□□ 0.14
USB1-211ENST00000565662 CCR8P51685 355 aa15.93■□□□□ 0.14
USB1-211ENST00000565662 RBM20Q5T481 1227 aaKnown RBP15.93■□□□□ 0.14
USB1-211ENST00000565662 AGAP7PQ5VUJ5 663 aa15.93■□□□□ 0.14
USB1-211ENST00000565662 RIPOR1Q6ZS17 1223 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 882.4 ms