RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 THAP11Q96EK4 314 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 LINGO1Q96FE5 620 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 VPS39Q96JC1 886 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 CABS1Q96KC9 395 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 WDR83Q9BRX9 315 aaKnown RBP12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 SEMA3GQ9NS98 782 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 GPR83Q9NYM4 423 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 STOX2Q9P2F5 926 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 ZNF282Q9UDV7 671 aaPredicted RBP12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 ADAMTS6Q9UKP5 1117 aa12.56□□□□□ -0.4
HNRNPC-205ENST00000553300 KCNE1BA0A087WTH5 132 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 VSTM2BA6NLU5 285 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 H7BY64 318 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 K7EM74 188 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 AGPSO00116 658 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 DPM1O60762 260 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 CNOT3O75175 753 aaKnown RBP12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 TSPAN12O95859 305 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 UMODP07911 640 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 GRK3P35626 688 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 RPS15AP62244 130 aaKnown RBP12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 TBPL1P62380 186 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 NDUFA9Q16795 377 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 DCAF10Q5QP82 559 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 PRAMEF13Q5VWM6 474 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 DUPD1Q68J44 220 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 CAPN13Q6MZZ7 669 aaPredicted RBP12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 LCTLQ6UWM7 567 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 SYT10Q6XYQ8 523 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 COX15Q7KZN9 410 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 STRA8Q7Z7C7 330 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 NKAPQ8N5F7 415 aaKnown RBP12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 CSNK1A1LQ8N752 337 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 CDKL2Q92772 493 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 PRAP1Q96NZ9 151 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 SPSB2Q99619 263 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 HAUS8Q9BT25 410 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 PHACTR1Q9C0D0 580 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 RAB17Q9H0T7 212 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 EPN3Q9H201 632 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 CLMPQ9H6B4 373 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 ATP13A2Q9NQ11 1180 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 ABCF3Q9NUQ8 709 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 P4HTMQ9NXG6 502 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 ARL15Q9NXU5 204 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 C5AR2Q9P296 337 aa12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 NOVA2Q9UNW9 492 aaKnown RBP12.55□□□□□ -0.4
HNRNPC-205ENST00000553300 FLNBO75369 2602 aaKnown RBP12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 PCDH17O14917 1159 aa12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 RAD51CO43502 376 aa12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 NRP2O60462 931 aa12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 IPO13O94829 963 aaKnown RBP12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 ALPPP05187 535 aa12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 GSTA2P09210 222 aa12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 NR1D1P20393 614 aa12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 OR1D4P47884 311 aa12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 NAE1Q13564 534 aa12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 DSG2Q14126 1118 aa12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 FAM53BQ14153 422 aa12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 FASTKD3Q14CZ7 662 aaKnown RBP12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 PPP1R32Q7Z5V6 425 aa12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 ZC3HC1Q86WB0 502 aaKnown RBP12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 C17orf64Q86WR6 236 aa12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 GALNT16Q8N428 558 aa12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 FDCSPQ8NFU4 85 aa12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 SMAD5Q99717 465 aaKnown RBP12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 SGPP1Q9BX95 441 aa12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 DPH5Q9H2P9 285 aa12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 RHOJQ9H4E5 214 aa12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 POPDC3Q9HBV1 291 aa12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 SLC17A6Q9P2U8 582 aa12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 CDC23Q9UJX2 597 aa12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 RUVBL1Q9Y265 456 aaKnown RBP12.54□□□□□ -0.4
HNRNPC-205ENST00000553300 UBR5O95071 2799 aaPredicted RBP12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 PRRC2CQ9Y520 2896 aaKnown RBP12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 IGLV3-12A0A075B6K2 115 aa12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 FAM95CA0A1B0GW59 222 aa12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 A6NL46 340 aa12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 PDGFAP04085 211 aa12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 ANXA5P08758 320 aa12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 ZGLP1P0C6A0 271 aa12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 FBLP22087 321 aaKnown RBP12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 CKAP4Q07065 602 aaKnown RBP12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 AIMP2Q13155 320 aaKnown RBP12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 MYBPC3Q14896 1274 aa12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 PHKG1Q16816 387 aa12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 VWA5B1Q5TIE3 1220 aa12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 ZNF572Q7Z3I7 529 aaPredicted RBP12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 STT3BQ8TCJ2 826 aa12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 MIEF2Q96C03 454 aa12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 FBXL8Q96CD0 374 aa12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 C10orf90Q96M02 699 aa12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 OLFM1Q99784 485 aa12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 TRIM4Q9C037 500 aa12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 DRC3Q9H069 523 aa12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 ATG10Q9H0Y0 220 aa12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 CUEDC1Q9NWM3 386 aaPredicted RBP12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 TXNDC16Q9P2K2 825 aa12.53□□□□□ -0.4
HNRNPC-205ENST00000553300 CTSFQ9UBX1 484 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 301.8 ms