RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 DSELQ8IZU8 1212 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 KREMEN2Q8NCW0 462 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 BBS10Q8TAM1 723 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 SLC22A8Q8TCC7 542 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 DNAJA4Q8WW22 397 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 FIG4Q92562 907 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 GMLQ99445 158 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 CDC6Q99741 560 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 PDCD10Q9BUL8 212 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ASPNQ9BXN1 380 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 SOHLH2Q9NX45 425 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 NINJ2Q9NZG7 142 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 DNAJB9Q9UBS3 223 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 WDR27A2RRH5 827 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 DUX1O43812 170 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 BNIP3LO60238 219 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 NOBOXO60393 691 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 SMNDC1O75940 238 aaKnown RBP eCLIP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 KRT33AO76009 404 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 RETP07949 1114 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 FHP07954 510 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 RPL17P18621 184 aaKnown RBP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 GCSHP23434 173 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 SLC6A4P31645 630 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 CASP4P49662 377 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 GBX2P52951 348 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 RGS8P57771 180 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 PRPS1P60891 318 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 PSME3P61289 254 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ZNF45Q02386 682 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ZNF763Q0D2J5 394 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 DOC2AQ14183 400 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 PTPRRQ15256 657 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 FAM209AQ5JX71 171 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 GLRA4Q5JXX5 417 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ZNF730Q6ZMV8 503 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 AHSA2Q719I0 299 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 CPB2Q96IY4 423 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 CPXM1Q96SM3 734 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 Q9N2J8 555 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ARHGEF4Q9NR80 690 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ASB6Q9NWX5 421 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 OR6C2Q9NZP2 312 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 NDOR1Q9UHB4 597 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 TMEM59LQ9UK28 342 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 SAMHD1Q9Y3Z3 626 aaKnown RBP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 GMPPBQ9Y5P6 360 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 KIAA1549Q9HCM3 1950 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 MAGEB17A8MXT2 336 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 E7ESA3 106 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 M0QZQ0 153 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 SNX4O95219 450 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 PRAMEF1O95521 474 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 TCN1P20061 433 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 TGFBR3Q03167 851 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 PPP3CAQ08209 521 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 TUBB3Q13509 450 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 RAB33AQ14088 237 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 SF1Q15637 639 aaKnown RBP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 KCTD21Q4G0X4 260 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 FRG2Q64ET8 278 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 USP30Q70CQ3 517 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 KRT77Q7Z794 578 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 FRG2BQ96QU4 278 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 RTP3Q9BQQ7 232 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ABCG4Q9H172 646 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 TEX264Q9Y6I9 313 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 MBLAC1A4D2B0 266 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 OR51F1A6NGY5 319 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 CAPN8A6NHC0 703 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 BTBD19C9JJ37 291 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 FFAR2O15552 330 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 GRID2O43424 1007 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 OLFM2O95897 454 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 S1PR4O95977 384 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ATP6V1B2P21281 511 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 S100A1P23297 94 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 PCBD1P61457 104 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 TARBP2Q15633 366 aaKnown RBP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 KCTD18Q6PI47 426 aaPredicted RBP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 TRAF7Q6Q0C0 670 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 SPESP1Q6UW49 350 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 LAPTM4BQ86VI4 370 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 PAQR7Q86WK9 346 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ARMC8Q8IUR7 673 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ZMIZ2Q8NF64 920 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 LCN9Q8WX39 176 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 TLCD1Q96CP7 247 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 KCTD12Q96CX2 325 aaKnown RBP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 CDADC1Q9BWV3 514 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 ADAMTS10Q9H324 1103 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 PELI2Q9HAT8 420 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 EMC3Q9P0I2 261 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 AASSQ9UDR5 926 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 CPA4Q9UI42 421 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 NOCTQ9UK39 431 aaKnown RBP4.81□□□□□ -1.64
PTPN13-209ENST00000511467 SLC6A14Q9UN76 642 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 WASF3Q9UPY6 502 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 PSAT1Q9Y617 370 aa4.81□□□□□ -1.64
PTPN13-209ENST00000511467 DGKBQ9Y6T7 804 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms