RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 SRSF9Q13242 221 aaKnown RBP eCLIP1.73□□□□□ -2.13
CCDC93-209ENST00000488908 BIRC3Q13489 604 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 BIRC2Q13490 618 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 TIMM50Q3ZCQ8 353 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 PAMR1Q6UXH9 720 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 TDRD7Q8NHU6 1098 aaKnown RBP1.73□□□□□ -2.13
CCDC93-209ENST00000488908 ZNF721Q8TF20 911 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 U2AF1L4Q8WU68 220 aaKnown RBP1.73□□□□□ -2.13
CCDC93-209ENST00000488908 LRRC59Q96AG4 307 aaKnown RBP1.73□□□□□ -2.13
CCDC93-209ENST00000488908 THOC1Q96FV9 657 aaKnown RBP1.73□□□□□ -2.13
CCDC93-209ENST00000488908 SRSF8Q9BRL6 282 aaKnown RBP1.73□□□□□ -2.13
CCDC93-209ENST00000488908 SPATC1LQ9H0A9 340 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 HRH4Q9H3N8 390 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 CUTCQ9NTM9 273 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 CORO1CQ9ULV4 474 aaPredicted RBP1.73□□□□□ -2.13
CCDC93-209ENST00000488908 CHKBQ9Y259 395 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 TMED3Q9Y3Q3 217 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 AUP1Q9Y679 476 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 ARID2Q68CP9 1835 aa1.73□□□□□ -2.13
CCDC93-209ENST00000488908 MYH14Q7Z406 1995 aaKnown RBP1.72□□□□□ -2.13
CCDC93-209ENST00000488908 BAIAP3O94812 1187 aa1.72□□□□□ -2.13
CCDC93-209ENST00000488908 RB1P06400 928 aa1.72□□□□□ -2.13
CCDC93-209ENST00000488908 QDPRP09417 244 aa1.72□□□□□ -2.13
CCDC93-209ENST00000488908 ADORA3P0DMS8 318 aa1.72□□□□□ -2.13
CCDC93-209ENST00000488908 HAPLN1P10915 354 aaPredicted RBP1.72□□□□□ -2.13
CCDC93-209ENST00000488908 SELEP16581 610 aa1.72□□□□□ -2.13
CCDC93-209ENST00000488908 EDNRAP25101 427 aa1.72□□□□□ -2.13
CCDC93-209ENST00000488908 GIFP27352 417 aa1.72□□□□□ -2.13
CCDC93-209ENST00000488908 ACSL1P33121 698 aa1.72□□□□□ -2.13
CCDC93-209ENST00000488908 ALDH3A2P51648 485 aa1.72□□□□□ -2.13
CCDC93-209ENST00000488908 CRYMQ14894 314 aa1.72□□□□□ -2.13
CCDC93-209ENST00000488908 ALDH1L2Q3SY69 923 aa1.72□□□□□ -2.13
CCDC93-209ENST00000488908 XKR4Q5GH76 650 aa1.72□□□□□ -2.13
CCDC93-209ENST00000488908 ARHGAP22Q7Z5H3 698 aa1.72□□□□□ -2.13
CCDC93-209ENST00000488908 FBXO39Q8N4B4 442 aa1.72□□□□□ -2.13
CCDC93-209ENST00000488908 THAP8Q8NA92 274 aa1.72□□□□□ -2.13
CCDC93-209ENST00000488908 MUC13Q9H3R2 512 aa1.72□□□□□ -2.13
CCDC93-209ENST00000488908 MARCH7Q9H992 704 aa1.72□□□□□ -2.13
CCDC93-209ENST00000488908 Q9N2K0 584 aa1.72□□□□□ -2.13
CCDC93-209ENST00000488908 DIAPH3Q9NSV4 1193 aa1.72□□□□□ -2.13
CCDC93-209ENST00000488908 ZNF148Q9UQR1 794 aa1.72□□□□□ -2.13
CCDC93-209ENST00000488908 KLF18A0A0U1RQI7 1052 aa1.71□□□□□ -2.14
CCDC93-209ENST00000488908 CDRT15L2A8MXV6 281 aa1.71□□□□□ -2.14
CCDC93-209ENST00000488908 MTRF1O75570 445 aaKnown RBP1.71□□□□□ -2.14
CCDC93-209ENST00000488908 ZWINTO95229 277 aa1.71□□□□□ -2.14
CCDC93-209ENST00000488908 VENTXO95231 258 aa1.71□□□□□ -2.14
CCDC93-209ENST00000488908 OR2C1O95371 312 aa1.71□□□□□ -2.14
CCDC93-209ENST00000488908 CLTBP09497 229 aa1.71□□□□□ -2.14
CCDC93-209ENST00000488908 ZNF133P52736 654 aaPredicted RBP1.71□□□□□ -2.14
CCDC93-209ENST00000488908 CDH8P55286 799 aa1.71□□□□□ -2.14
CCDC93-209ENST00000488908 GPR33Q49SQ1 333 aa1.71□□□□□ -2.14
CCDC93-209ENST00000488908 ZNF506Q5JVG8 444 aa1.71□□□□□ -2.14
CCDC93-209ENST00000488908 CELF3Q5SZQ8 465 aaKnown RBP1.71□□□□□ -2.14
CCDC93-209ENST00000488908 TMPRSS11BQ86T26 416 aa1.71□□□□□ -2.14
CCDC93-209ENST00000488908 TMEM173Q86WV6 379 aaPredicted RBP1.71□□□□□ -2.14
CCDC93-209ENST00000488908 RPAP2Q8IXW5 612 aaPredicted RBP1.71□□□□□ -2.14
CCDC93-209ENST00000488908 NDUFAF2Q8N183 169 aa1.71□□□□□ -2.14
CCDC93-209ENST00000488908 SLC22A18Q96BI1 424 aa1.71□□□□□ -2.14
CCDC93-209ENST00000488908 CFAP57Q96MR6 1250 aa1.71□□□□□ -2.14
CCDC93-209ENST00000488908 TAAR6Q96RI8 345 aa1.71□□□□□ -2.14
CCDC93-209ENST00000488908 CCDC3Q9BQI4 270 aa1.71□□□□□ -2.14
CCDC93-209ENST00000488908 ZMYND12Q9H0C1 365 aa1.71□□□□□ -2.14
CCDC93-209ENST00000488908 MOB1AQ9H8S9 216 aa1.71□□□□□ -2.14
CCDC93-209ENST00000488908 DPP3Q9NY33 737 aa1.71□□□□□ -2.14
CCDC93-209ENST00000488908 STK26Q9P289 416 aa1.71□□□□□ -2.14
CCDC93-209ENST00000488908 PLEKHA6Q9Y2H5 1048 aa1.71□□□□□ -2.14
CCDC93-209ENST00000488908 PIAS3Q9Y6X2 628 aa1.71□□□□□ -2.14
CCDC93-209ENST00000488908 ZNF644Q9H582 1327 aaPredicted RBP1.7□□□□□ -2.14
CCDC93-209ENST00000488908 TMEM221A6NGB7 291 aa1.7□□□□□ -2.14
CCDC93-209ENST00000488908 F8VVB4 439 aa1.7□□□□□ -2.14
CCDC93-209ENST00000488908 F8VWA3 439 aa1.7□□□□□ -2.14
CCDC93-209ENST00000488908 MEIS2O14770 477 aa1.7□□□□□ -2.14
CCDC93-209ENST00000488908 LATO43561 262 aa1.7□□□□□ -2.14
CCDC93-209ENST00000488908 RNASEH2AO75792 299 aaKnown RBP1.7□□□□□ -2.14
CCDC93-209ENST00000488908 TMEM63AO94886 807 aa1.7□□□□□ -2.14
CCDC93-209ENST00000488908 RTN3O95197 1032 aaPredicted RBP1.7□□□□□ -2.14
CCDC93-209ENST00000488908 GJA1P17302 382 aa1.7□□□□□ -2.14
CCDC93-209ENST00000488908 ABCE1P61221 599 aaKnown RBP1.7□□□□□ -2.14
CCDC93-209ENST00000488908 TRAP1Q12931 704 aaKnown RBP1.7□□□□□ -2.14
CCDC93-209ENST00000488908 TSTQ16762 297 aaKnown RBP1.7□□□□□ -2.14
CCDC93-209ENST00000488908 TMEM44Q2T9K0 475 aa1.7□□□□□ -2.14
CCDC93-209ENST00000488908 DHRS7BQ6IAN0 325 aaPredicted RBP1.7□□□□□ -2.14
CCDC93-209ENST00000488908 EMBQ6PCB8 327 aa1.7□□□□□ -2.14
CCDC93-209ENST00000488908 CHST9Q7L1S5 443 aa1.7□□□□□ -2.14
CCDC93-209ENST00000488908 GPC2Q8N158 579 aa1.7□□□□□ -2.14
CCDC93-209ENST00000488908 C17orf53Q8N3J3 647 aaPredicted RBP1.7□□□□□ -2.14
CCDC93-209ENST00000488908 FLVCR1-AS1Q8TAF5 88 aa1.7□□□□□ -2.14
CCDC93-209ENST00000488908 PIK3R3Q92569 461 aa1.7□□□□□ -2.14
CCDC93-209ENST00000488908 CCDC34Q96HJ3 373 aa1.7□□□□□ -2.14
CCDC93-209ENST00000488908 MAPKAP1Q9BPZ7 522 aa1.7□□□□□ -2.14
CCDC93-209ENST00000488908 STRADBQ9C0K7 418 aa1.7□□□□□ -2.14
CCDC93-209ENST00000488908 UBN1Q9NPG3 1134 aa1.7□□□□□ -2.14
CCDC93-209ENST00000488908 Q9UF83 564 aa1.7□□□□□ -2.14
CCDC93-209ENST00000488908 CRYL1Q9Y2S2 319 aa1.7□□□□□ -2.14
CCDC93-209ENST00000488908 IFRD1O00458 451 aaPredicted RBP1.69□□□□□ -2.14
CCDC93-209ENST00000488908 ECE2O60344 883 aa1.69□□□□□ -2.14
CCDC93-209ENST00000488908 GJB3O75712 270 aa1.69□□□□□ -2.14
CCDC93-209ENST00000488908 GPX3P22352 226 aa1.69□□□□□ -2.14
CCDC93-209ENST00000488908 TMEM266Q2M3C6 531 aa1.69□□□□□ -2.14
CCDC93-209ENST00000488908 NHLRC3Q5JS37 347 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms