RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 C1orf52Q8N6N3 182 aaKnown RBP10.09□□□□□ -0.79
CPNE1-218ENST00000439806 FAM86B1Q8N7N1 296 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 ZNF555Q8NEP9 628 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 SUSD6Q92537 303 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 SNX19Q92543 992 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 PYURFQ96I23 114 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 MPP4Q96JB8 637 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 ZNF514Q96K75 400 aaPredicted RBP10.09□□□□□ -0.79
CPNE1-218ENST00000439806 EGLN2Q96KS0 407 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 RDH12Q96NR8 316 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 OR4K3Q96R72 315 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 YTHDF1Q9BYJ9 559 aaKnown RBP10.09□□□□□ -0.79
CPNE1-218ENST00000439806 RBM38Q9H0Z9 239 aaKnown RBP10.09□□□□□ -0.79
CPNE1-218ENST00000439806 SFXN1Q9H9B4 322 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 CARS2Q9HA77 564 aaKnown RBP10.09□□□□□ -0.79
CPNE1-218ENST00000439806 NTN4Q9HB63 628 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 SLC6A13Q9NSD5 602 aa10.09□□□□□ -0.79
CPNE1-218ENST00000439806 DCAF13Q9NV06 445 aaKnown RBP10.09□□□□□ -0.79
CPNE1-218ENST00000439806 PCM1Q15154 2024 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 MGAT4DA6NG13 374 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 MAGEB17A8MXT2 336 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 CLIC1O00299 241 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 UPK1AO00322 258 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 NPC1O15118 1278 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 VEGFDO43915 354 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 SH3BGRLO75368 114 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 E2F6O75461 281 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 CCNDBP1O95273 360 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 CLIC3O95833 236 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 SLC16A8O95907 504 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 ANXA4P09525 319 aaPredicted RBP10.08□□□□□ -0.8
CPNE1-218ENST00000439806 ENGP17813 658 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 IL1RNP18510 177 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 PPIBP23284 216 aaKnown RBP10.08□□□□□ -0.8
CPNE1-218ENST00000439806 TIA1P31483 386 aaKnown RBP eCLIP10.08□□□□□ -0.8
CPNE1-218ENST00000439806 C21orf58P58505 322 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 RPS13P62277 151 aaKnown RBP10.08□□□□□ -0.8
CPNE1-218ENST00000439806 ADARB1P78563 741 aaKnown RBP10.08□□□□□ -0.8
CPNE1-218ENST00000439806 LSAMPQ13449 338 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 LAPTM5Q13571 262 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 SLBPQ14493 270 aaKnown RBP eCLIP10.08□□□□□ -0.8
CPNE1-218ENST00000439806 MYBPC3Q14896 1274 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 NKG7Q16617 165 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 HKDC1Q2TB90 917 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 LRRC23Q53EV4 343 aaPredicted RBP10.08□□□□□ -0.8
CPNE1-218ENST00000439806 CYBRD1Q53TN4 286 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 CCNYL2Q5T2Q4 361 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 CPTPQ5TA50 214 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 ANXA8L1Q5VT79 327 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 CES5AQ6NT32 575 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 ZCCHC8Q6NZY4 707 aaKnown RBP10.08□□□□□ -0.8
CPNE1-218ENST00000439806 SPESP1Q6UW49 350 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 GET4Q7L5D6 327 aaPredicted RBP10.08□□□□□ -0.8
CPNE1-218ENST00000439806 GPR141Q7Z602 305 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 NPAS3Q8IXF0 933 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 CPA6Q8N4T0 437 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 VPS37AQ8NEZ2 397 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 GPR156Q8NFN8 814 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 OR9A1PQ8NGU1 263 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 ZFP28Q8NHY6 868 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 NETO1Q8TDF5 533 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 ZNF480Q8WV37 535 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 SMARCD2Q92925 531 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 ASB16Q96NS5 453 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 HHIPQ96QV1 700 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 EFCAB11Q9BUY7 163 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 DUSP26Q9BV47 211 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 TRIM39Q9HCM9 518 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 ITM2CQ9NQX7 267 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 USE1Q9NZ43 259 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 ATXN10Q9UBB4 475 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 RSL24D1Q9UHA3 163 aaKnown RBP10.08□□□□□ -0.8
CPNE1-218ENST00000439806 RPS6KA6Q9UK32 745 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 SAMD4AQ9UPU9 718 aaKnown RBP10.08□□□□□ -0.8
CPNE1-218ENST00000439806 CORO2BQ9UQ03 480 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 ORC6Q9Y5N6 252 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 COL4A3Q01955 1670 aa10.08□□□□□ -0.8
CPNE1-218ENST00000439806 C17orf113A0A1B0GUU1 675 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 GNG14A0A1W2PPG7 69 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 H3BSA7 217 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 HS6ST1O60243 411 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 PCDH7O60245 1069 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 LILRB5O75023 590 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 POP7O75817 140 aaKnown RBP10.07□□□□□ -0.8
CPNE1-218ENST00000439806 ZNF682O95780 498 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 B3GALT4O96024 378 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 SOD1P00441 154 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 C1GALT1C1LP0DN25 315 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 CALRP27797 417 aaKnown RBP10.07□□□□□ -0.8
CPNE1-218ENST00000439806 PTPN6P29350 595 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 WNT3P56703 355 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 DPTQ07507 201 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 LRRC74AQ0VAA2 488 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 BIRC2Q13490 618 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 GAB4Q2WGN9 574 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 ZNF658BQ4V348 819 aaPredicted RBP10.07□□□□□ -0.8
CPNE1-218ENST00000439806 C10orf62Q5T681 223 aaPredicted RBP10.07□□□□□ -0.8
CPNE1-218ENST00000439806 TTC23Q5W5X9 447 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 CPZQ66K79 652 aa10.07□□□□□ -0.8
CPNE1-218ENST00000439806 UNC5DQ6UXZ4 953 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms