RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 KCNE2Q9Y6J6 123 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 AK5Q9Y6K8 562 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 ACACBO00763 2458 aa13.8□□□□□ -0.2
CSTF3-202ENST00000431742 A8MT66 165 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 TMEM150CB9EJG8 249 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 H7BY64 318 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 K7EPI3 171 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 COPEO14579 308 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 HAT1O14929 419 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 RGS16O15492 202 aaPredicted RBP13.79□□□□□ -0.2
CSTF3-202ENST00000431742 PLIN3O60664 434 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 SMIM24O75264 130 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 PROCP04070 461 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 SLC5A2P31639 672 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 PCDH1Q08174 1060 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 E2F2Q14209 437 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 PDK4Q16654 411 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 ZC3H12BQ5HYM0 836 aaKnown RBP13.79□□□□□ -0.2
CSTF3-202ENST00000431742 FBXO42Q6P3S6 717 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 OR1L3Q8NH93 324 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 PRAP1Q96NZ9 151 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 FCRL4Q96PJ5 515 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 ZFYVE21Q9BQ24 234 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 SARGQ9BW04 601 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 SPRY4Q9C004 299 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 PELI2Q9HAT8 420 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 FANCEQ9HB96 536 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 THSD1Q9NS62 852 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 GRID1Q9ULK0 1009 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 DYRK1BQ9Y463 629 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 SEC16AO15027 2179 aa13.79□□□□□ -0.2
CSTF3-202ENST00000431742 ANKRD11Q6UB99 2663 aaPredicted RBP13.78□□□□□ -0.2
CSTF3-202ENST00000431742 LRRC14BA6NHZ5 514 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.78□□□□□ -0.2
CSTF3-202ENST00000431742 E7EQ34 232 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 PRAMEF4O60810 478 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 SIX3O95343 332 aaPredicted RBP13.78□□□□□ -0.2
CSTF3-202ENST00000431742 TIAF1O95411 115 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 CTSBP07858 339 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 CREB1P16220 341 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 GNAZP19086 355 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 GCGRP47871 477 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 CCR8P51685 355 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 ITGA1P56199 1179 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 REEP5Q00765 189 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 CYP4F3Q08477 520 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 CCDC153Q494R4 210 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 CATSPEREQ5SY80 951 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 TMEM164Q5U3C3 297 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 PRAMEF9Q5VWM5 478 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 FRMPD2BQ6IN97 320 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 PWWP2BQ6NUJ5 590 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 NXPE4Q6UWF7 544 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 UNQ6494/PRO21346Q6UXR6 183 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 SLCO4C1Q6ZQN7 724 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 TMPRSS11BQ86T26 416 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 PPP1R3BQ86XI6 285 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 MCATQ8IVS2 390 aaKnown RBP13.78□□□□□ -0.2
CSTF3-202ENST00000431742 MDM1Q8TC05 714 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 WDR34Q96EX3 536 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 OR2A5Q96R48 311 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 C1QTNF3Q9BXJ4 246 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 SPNS1Q9H2V7 528 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 EHD1Q9H4M9 534 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 OPTCQ9UBM4 332 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 PLLPQ9Y342 182 aa13.78□□□□□ -0.2
CSTF3-202ENST00000431742 TMEM184BQ9Y519 407 aaPredicted RBP13.78□□□□□ -0.2
CSTF3-202ENST00000431742 TNPO3Q9Y5L0 923 aaKnown RBP13.78□□□□□ -0.2
CSTF3-202ENST00000431742 KCNE1BA0A087WTH5 132 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 A0A0J9YVX5 310 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 C1QTNF9BB2RNN3 333 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 G3V2L1 256 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 AGPSO00116 658 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 E2F3O00716 465 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 TYROBPO43914 113 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 DLX3O60479 287 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 CCNT2O60583 730 aaKnown RBP13.77□□□□□ -0.21
CSTF3-202ENST00000431742 SRPX2O60687 465 aaPredicted RBP13.77□□□□□ -0.21
CSTF3-202ENST00000431742 DLGAP3O95886 979 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 RPS17P08708 135 aaKnown RBP13.77□□□□□ -0.21
CSTF3-202ENST00000431742 C1QTNF9P0C862 333 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 TAC1P20366 129 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 ATP5F1P24539 256 aaPredicted RBP13.77□□□□□ -0.21
CSTF3-202ENST00000431742 CD82P27701 267 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 EEF1DP29692 281 aaKnown RBP13.77□□□□□ -0.21
CSTF3-202ENST00000431742 ATG9BQ674R7 924 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 ZYG11AQ6WRX3 759 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 ADCK2Q7Z695 626 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 EXOC3L1Q86VI1 746 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 PLD3Q8IV08 490 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 SNX31Q8N9S9 440 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 SNIP1Q8TAD8 396 aaKnown RBP13.77□□□□□ -0.21
CSTF3-202ENST00000431742 RDH11Q8TC12 318 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 PHF21BQ96EK2 531 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 SMC6Q96SB8 1091 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 SELENOSQ9BQE4 189 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 CAPS2Q9BXY5 557 aa13.77□□□□□ -0.21
CSTF3-202ENST00000431742 C12orf65Q9H3J6 166 aaKnown RBP13.77□□□□□ -0.21
CSTF3-202ENST00000431742 CCDC86Q9H6F5 360 aaKnown RBP13.77□□□□□ -0.21
CSTF3-202ENST00000431742 VIPAS39Q9H9C1 493 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms