RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 GFM1Q96RP9 751 aaKnown RBP16.93■□□□□ 0.3
PTPRU-202ENST00000373779 COMMD3Q9UBI1 195 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 OAS3Q9Y6K5 1087 aaKnown RBP16.93■□□□□ 0.3
PTPRU-202ENST00000373779 ORC5O43913 435 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 FYNP06241 537 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 BCKDHAP12694 445 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 CD72P21854 359 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 OXTRP30559 389 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 FOXA1P55317 472 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 PHC1P78364 1004 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 TCEA2Q15560 299 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 MED28Q9H204 178 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 TREX1Q9NSU2 369 aa16.93■□□□□ 0.3
PTPRU-202ENST00000373779 DNAJC25-GNG10A0A024R161 153 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 TFAP2AP05549 437 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 PIK3CBP42338 1070 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 SP140Q13342 867 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 NFATC2Q13469 925 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 TPGS2Q68CL5 300 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 LRRC66Q68CR7 880 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 TPRG1Q6ZUI0 275 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 RNF44Q7L0R7 432 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 NXPE1Q8N323 547 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 PNPLA1Q8N8W4 532 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 AQP11Q8NBQ7 271 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 FAM98AQ8NCA5 519 aaKnown RBP16.92■□□□□ 0.3
PTPRU-202ENST00000373779 PKP4Q99569 1192 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 LHPPQ9H008 270 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 PAK1IP1Q9NWT1 392 aaPredicted RBP16.92■□□□□ 0.3
PTPRU-202ENST00000373779 CLEC4AQ9UMR7 237 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 LARS2Q15031 903 aaKnown RBP16.92■□□□□ 0.3
PTPRU-202ENST00000373779 PAGE3Q5JUK9 113 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 KDELC1Q6UW63 502 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 DNAJB7Q7Z6W7 309 aaPredicted RBP16.92■□□□□ 0.3
PTPRU-202ENST00000373779 ADGRG5Q8IZF4 528 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 SLC15A4Q8N697 577 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 MALT1Q9UDY8 824 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 MT-ND2P03891 347 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 JUNP05412 331 aaKnown RBP16.92■□□□□ 0.3
PTPRU-202ENST00000373779 SKP1P63208 163 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 ANKRD26P1Q6NSI1 321 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 BEND5Q7L4P6 421 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 MND1Q9BWT6 205 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 KCNN2Q9H2S1 579 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 OR6A2O95222 327 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 PDYNP01213 254 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 PORP16435 677 aaPredicted RBP16.92■□□□□ 0.3
PTPRU-202ENST00000373779 KCNA5P22460 613 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 KHKP50053 298 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 ZNF598Q86UK7 904 aaKnown RBP16.92■□□□□ 0.3
PTPRU-202ENST00000373779 DCAF4L2Q8NA75 395 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 KCTD7Q96MP8 289 aa16.92■□□□□ 0.3
PTPRU-202ENST00000373779 OR10H2O60403 315 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 E2F2Q14209 437 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 BEND7Q8N7W2 519 aaPredicted RBP16.91■□□□□ 0.3
PTPRU-202ENST00000373779 TRIB3Q96RU7 358 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 RIOK2Q9BVS4 552 aaKnown RBP16.91■□□□□ 0.3
PTPRU-202ENST00000373779 TRIT1Q9H3H1 467 aaKnown RBP16.91■□□□□ 0.3
PTPRU-202ENST00000373779 MCUBQ9NWR8 336 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 PRSS56P0CW18 603 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 CSTF2P33240 577 aaKnown RBP eCLIP16.91■□□□□ 0.3
PTPRU-202ENST00000373779 PSMD4P55036 377 aaKnown RBP16.91■□□□□ 0.3
PTPRU-202ENST00000373779 PON2Q15165 354 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 GDPD4Q6W3E5 623 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 ZNF517Q6ZMY9 492 aaPredicted RBP16.91■□□□□ 0.3
PTPRU-202ENST00000373779 MFSD2AQ8NA29 543 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 SLC30A2Q9BRI3 323 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 POLE4Q9NR33 117 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 OSER1Q9NX31 292 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 NCKAP1Q9Y2A7 1128 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 VMACQ2NL98 169 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 NOXRED1Q6NXP6 359 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 ZNF45Q02386 682 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 SF1Q15637 639 aaKnown RBP16.91■□□□□ 0.3
PTPRU-202ENST00000373779 SLC30A3Q99726 388 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 UCK2Q9BZX2 261 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 NECTIN3Q9NQS3 549 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 CALML5Q9NZT1 146 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 NRAPQ86VF7 1730 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 H1F0P07305 194 aaKnown RBP16.91■□□□□ 0.3
PTPRU-202ENST00000373779 SAGP10523 405 aaPredicted RBP16.91■□□□□ 0.3
PTPRU-202ENST00000373779 BDKRB1P46663 353 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 ERVPABLB-1P60509 514 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 CRB2Q5IJ48 1285 aa16.91■□□□□ 0.3
PTPRU-202ENST00000373779 RERGQ96A58 199 aaPredicted RBP16.91■□□□□ 0.3
PTPRU-202ENST00000373779 AKAP7Q9P0M2 348 aaPredicted RBP16.91■□□□□ 0.3
PTPRU-202ENST00000373779 NUDT14O95848 222 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 PSKH1P11801 424 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 CRISP3P54108 245 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 PRR5P85299 388 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 UBXN11Q5T124 520 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 CHERPQ8IWX8 916 aaKnown RBP16.9■□□□□ 0.3
PTPRU-202ENST00000373779 SRFBP1Q8NEF9 429 aaKnown RBP16.9■□□□□ 0.3
PTPRU-202ENST00000373779 ZNF675Q8TD23 568 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 SLC9A6Q92581 669 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 LMAN2LQ9H0V9 348 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 OR2AG1Q9H205 316 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 MEIS3P2A8K0S8 358 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 GNAO1P09471 354 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 GTF2E2P29084 291 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms