RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 OR2T29Q8NH02 315 aa17.49■□□□□ 0.39
CD40-201ENST00000372276 UBE2E3Q969T4 207 aa17.49■□□□□ 0.39
CD40-201ENST00000372276 TCEAL4Q96EI5 215 aa17.49■□□□□ 0.39
CD40-201ENST00000372276 WDR34Q96EX3 536 aa17.49■□□□□ 0.39
CD40-201ENST00000372276 C11orf24Q96F05 449 aaPredicted RBP17.49■□□□□ 0.39
CD40-201ENST00000372276 EFCAB11Q9BUY7 163 aa17.49■□□□□ 0.39
CD40-201ENST00000372276 EHD1Q9H4M9 534 aa17.49■□□□□ 0.39
CD40-201ENST00000372276 SGK2Q9HBY8 427 aa17.49■□□□□ 0.39
CD40-201ENST00000372276 ITM2CQ9NQX7 267 aa17.49■□□□□ 0.39
CD40-201ENST00000372276 HCFC1R1Q9NWW0 138 aa17.49■□□□□ 0.39
CD40-201ENST00000372276 SNX5Q9Y5X3 404 aa17.49■□□□□ 0.39
CD40-201ENST00000372276 MYOFQ9NZM1 2061 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 C17orf113A0A1B0GUU1 675 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 TRIM43BA6NCK2 446 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 ANKRD33BA6NCL7 494 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 FOXE1O00358 373 aaPredicted RBP17.48■□□□□ 0.39
CD40-201ENST00000372276 SCAMP2O15127 329 aaKnown RBP17.48■□□□□ 0.39
CD40-201ENST00000372276 TSPAN6O43657 245 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 HS6ST1O60243 411 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 PRAMEF4O60810 478 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 SCN2BO60939 215 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 SEC14L2O76054 403 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 ADH1CP00326 375 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 BMP1P13497 986 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 ENGP17813 658 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 DNAJA1P31689 397 aaKnown RBP17.48■□□□□ 0.39
CD40-201ENST00000372276 KDELR2P33947 212 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 BMPR1AP36894 532 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 DGKGP49619 791 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 RAB15P59190 212 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 CXCR4P61073 352 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 HPCAP84074 193 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 ACOX1Q15067 660 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 TEAD4Q15561 434 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 UGT8Q16880 541 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 CPTPQ5TA50 214 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 PRAMEF9Q5VWM5 478 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 MED27Q6P2C8 311 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 GALNT18Q6P9A2 607 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 ZNF621Q6ZSS3 439 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 EP400NLQ6ZTU2 488 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 R3HCC1LQ7Z5L2 792 aaKnown RBP17.48■□□□□ 0.39
CD40-201ENST00000372276 DCP2Q8IU60 420 aaKnown RBP17.48■□□□□ 0.39
CD40-201ENST00000372276 CELF5Q8N6W0 485 aaKnown RBP17.48■□□□□ 0.39
CD40-201ENST00000372276 RASGEF1AQ8N9B8 481 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 TMIEQ8NEW7 156 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 RAB2BQ8WUD1 216 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 CHTF18Q8WVB6 975 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 GAB3Q8WWW8 586 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 TRIM43Q96BQ3 446 aaPredicted RBP17.48■□□□□ 0.39
CD40-201ENST00000372276 COQ8BQ96D53 544 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 MBOAT4Q96T53 435 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 BCL7BQ9BQE9 202 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 DUSP26Q9BV47 211 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 LINC00597Q9H2U6 94 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 ATAD3AQ9NVI7 634 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 ETAA1Q9NY74 926 aa17.48■□□□□ 0.39
CD40-201ENST00000372276 ZNF282Q9UDV7 671 aaPredicted RBP17.48■□□□□ 0.39
CD40-201ENST00000372276 OR2AG2A6NM03 316 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 FADS2P1A8MWK0 482 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 H3BM21 787 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 NRG2O14511 850 aaPredicted RBP17.47■□□□□ 0.39
CD40-201ENST00000372276 HOXC11O43248 304 aaPredicted RBP17.47■□□□□ 0.39
CD40-201ENST00000372276 KCNK5O95279 499 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 FABP3P05413 133 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 FPR1P21462 350 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 PHEXP78562 749 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 KCNAB2Q13303 367 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 KEAP1Q14145 624 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 PRSS36Q5K4E3 855 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 ZNF691Q5VV52 312 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 TMEM215Q68D42 235 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 ZCCHC8Q6NZY4 707 aaKnown RBP17.47■□□□□ 0.39
CD40-201ENST00000372276 TMEM220Q6QAJ8 160 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 CBLL1Q75N03 491 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 ZZZ3Q8IYH5 903 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 SP7Q8TDD2 431 aaPredicted RBP17.47■□□□□ 0.39
CD40-201ENST00000372276 ADNPQ9H2P0 1102 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 TRIT1Q9H3H1 467 aaKnown RBP17.47■□□□□ 0.39
CD40-201ENST00000372276 SMURF2Q9HAU4 748 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 SLC6A13Q9NSD5 602 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 TSC22D4Q9Y3Q8 395 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 DYRK1BQ9Y463 629 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 MGAT4DA6NG13 374 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 ZBBXA8MT70 800 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 M0QX08 132 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 MTX2O75431 263 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 LRATO95237 230 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 FGBP02675 491 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 GSNP06396 782 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 MYCLP1P12525 358 aaPredicted RBP17.47■□□□□ 0.39
CD40-201ENST00000372276 SHMT2P34897 504 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 CDKN2CP42773 168 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 WNT3P56703 355 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 ERVFC1P60507 584 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 PPIGQ13427 754 aaKnown RBP eCLIP17.47■□□□□ 0.39
CD40-201ENST00000372276 GTF2H3Q13889 308 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 LRRC26Q2I0M4 334 aa17.47■□□□□ 0.39
CD40-201ENST00000372276 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.47■□□□□ 0.39
CD40-201ENST00000372276 ANKRD46Q86W74 232 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms