RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 ARHGAP9Q9BRR9 750 aa17.71■□□□□ 0.43
CHTOP-202ENST00000368687 CUTCQ9NTM9 273 aa17.71■□□□□ 0.43
CHTOP-202ENST00000368687 NDOR1Q9UHB4 597 aa17.71■□□□□ 0.43
CHTOP-202ENST00000368687 TLK1Q9UKI8 766 aa17.71■□□□□ 0.43
CHTOP-202ENST00000368687 FER1L5A0AVI2 2057 aa17.71■□□□□ 0.43
CHTOP-202ENST00000368687 KCNE1BA0A087WTH5 132 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 HYKKA2RU49 373 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 CDC7O00311 574 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 PRPF4O43172 522 aaKnown RBP eCLIP17.7■□□□□ 0.42
CHTOP-202ENST00000368687 PHGDHO43175 533 aaKnown RBP17.7■□□□□ 0.42
CHTOP-202ENST00000368687 KRT38O76015 456 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 ONECUT2O95948 504 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 F8A1P23610 371 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 SERPINB8P50452 374 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 PGGT1BP53609 377 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 EFTUD2Q15029 972 aaKnown RBP eCLIP17.7■□□□□ 0.423e-12■■■■□ 20.9
CHTOP-202ENST00000368687 TGFBIQ15582 683 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 TSNQ15631 228 aaKnown RBP17.7■□□□□ 0.42
CHTOP-202ENST00000368687 PTCHD3Q3KNS1 767 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 NKAIN1Q4KMZ8 207 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 FBXO42Q6P3S6 717 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 FAM199XQ6PEV8 388 aaPredicted RBP17.7■□□□□ 0.42
CHTOP-202ENST00000368687 FAM198BQ6UWH4 519 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 ABHD11Q8NFV4 315 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 STAG3L4Q8TBR4 150 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 SLC44A1Q8WWI5 657 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 KIAA1191Q96A73 305 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 OR2A5Q96R48 311 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 IFT80Q9P2H3 777 aaPredicted RBP17.7■□□□□ 0.42
CHTOP-202ENST00000368687 ZNF180Q9UJW8 692 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 CDC14AQ9UNH5 594 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 POLHQ9Y253 713 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 ACOT9Q9Y305 439 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 KCNE2Q9Y6J6 123 aa17.7■□□□□ 0.42
CHTOP-202ENST00000368687 FASNP49327 2511 aaKnown RBP17.69■□□□□ 0.42
CHTOP-202ENST00000368687 EIF4E1BA6NMX2 242 aaKnown RBP17.69■□□□□ 0.42
CHTOP-202ENST00000368687 H0YGG7 62 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 H7BY64 318 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 FAM155BO75949 473 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 ALBP02768 609 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 S100BP04271 92 aaPredicted RBP17.69■□□□□ 0.42
CHTOP-202ENST00000368687 PRB1P04280 392 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 LTA4HP09960 611 aaKnown RBP17.69■□□□□ 0.42
CHTOP-202ENST00000368687 SLC35E2BP0CK96 405 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 CD1DP15813 335 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 NPPBP16860 134 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 ALAS2P22557 587 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 CCR8P51685 355 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 ARF3P61204 181 aaPredicted RBP17.69■□□□□ 0.42
CHTOP-202ENST00000368687 CSHL1Q14406 222 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 UAP1Q16222 522 aaPredicted RBP17.69■□□□□ 0.42
CHTOP-202ENST00000368687 NDUFA9Q16795 377 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 UGT8Q16880 541 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 FAM83EQ2M2I3 478 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 PRTGQ2VWP7 1150 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 LGSNQ5TDP6 509 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 MROH9Q5TGP6 573 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 FRMPD2BQ6IN97 320 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 TTLL10Q6ZVT0 673 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 GPSM1Q86YR5 675 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 CSNK1A1LQ8N752 337 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 ENDOVQ8N8Q3 282 aaKnown RBP17.69■□□□□ 0.42
CHTOP-202ENST00000368687 ALKBH8Q96BT7 664 aaKnown RBP17.69■□□□□ 0.42
CHTOP-202ENST00000368687 PRAP1Q96NZ9 151 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 IP6K3Q96PC2 410 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 CAPS2Q9BXY5 557 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 ADNPQ9H2P0 1102 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 WDR54Q9H977 334 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 DHCR7Q9UBM7 475 aaKnown RBP17.69■□□□□ 0.42
CHTOP-202ENST00000368687 NXT1Q9UKK6 140 aaKnown RBP17.69■□□□□ 0.42
CHTOP-202ENST00000368687 TCFL5Q9UL49 500 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 DYRK1BQ9Y463 629 aa17.69■□□□□ 0.42
CHTOP-202ENST00000368687 SYCE1LA8MT33 242 aa17.68■□□□□ 0.42
CHTOP-202ENST00000368687 HAT1O14929 419 aa17.68■□□□□ 0.42
CHTOP-202ENST00000368687 NKX2-8O15522 239 aa17.68■□□□□ 0.42
CHTOP-202ENST00000368687 EIF2S1P05198 315 aaKnown RBP17.68■□□□□ 0.42
CHTOP-202ENST00000368687 PRKAR1AP10644 381 aa17.68■□□□□ 0.42
CHTOP-202ENST00000368687 TNFRSF8P28908 595 aa17.68■□□□□ 0.42
CHTOP-202ENST00000368687 MSH2P43246 934 aa17.68■□□□□ 0.42
CHTOP-202ENST00000368687 CCR10P46092 362 aa17.68■□□□□ 0.42
CHTOP-202ENST00000368687 PMS2P54278 862 aa17.68■□□□□ 0.42
CHTOP-202ENST00000368687 COL9A2Q14055 689 aaPredicted RBP17.68■□□□□ 0.42
CHTOP-202ENST00000368687 SULT1C3Q6IMI6 304 aa17.68■□□□□ 0.42
CHTOP-202ENST00000368687 C16orf46Q6P387 395 aa17.68■□□□□ 0.42
CHTOP-202ENST00000368687 KLC3Q6P597 504 aa17.68■□□□□ 0.42
CHTOP-202ENST00000368687 SPNS2Q8IVW8 549 aa17.68■□□□□ 0.42
CHTOP-202ENST00000368687 KLHDC8AQ8IYD2 350 aa17.68■□□□□ 0.42
CHTOP-202ENST00000368687 APOBEC4Q8WW27 367 aaKnown RBP17.68■□□□□ 0.42
CHTOP-202ENST00000368687 SLC5A11Q8WWX8 675 aa17.68■□□□□ 0.42
CHTOP-202ENST00000368687 SLC39A7Q92504 469 aa17.68■□□□□ 0.42
CHTOP-202ENST00000368687 NACC2Q96BF6 587 aa17.68■□□□□ 0.42
CHTOP-202ENST00000368687 RHBDF1Q96CC6 855 aa17.68■□□□□ 0.42
CHTOP-202ENST00000368687 RNF31Q96EP0 1072 aa17.68■□□□□ 0.42
CHTOP-202ENST00000368687 CABS1Q96KC9 395 aa17.68■□□□□ 0.42
CHTOP-202ENST00000368687 PAFAH2Q99487 392 aa17.68■□□□□ 0.42
CHTOP-202ENST00000368687 SARGQ9BW04 601 aa17.68■□□□□ 0.42
CHTOP-202ENST00000368687 AKIRIN1Q9H9L7 192 aaPredicted RBP17.68■□□□□ 0.42
CHTOP-202ENST00000368687 SNX15Q9NRS6 342 aa17.68■□□□□ 0.42
CHTOP-202ENST00000368687 CUEDC1Q9NWM3 386 aaPredicted RBP17.68■□□□□ 0.42
CHTOP-202ENST00000368687 TUBD1Q9UJT1 453 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms