RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 SULT4A1Q9BR01 284 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 SCP2D1Q9UJQ7 156 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 SHANK2Q9UPX8 1470 aa16.01■□□□□ 0.15
PTCH1-201ENST00000331920 B4GALT2O60909 372 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 OR4Q2P0C623 313 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 PAMR1Q6UXH9 720 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 C1orf21Q9H246 121 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 CHRAC1Q9NRG0 131 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 NUDT4Q9NZJ9 180 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 ATXN7L1Q9ULK2 861 aaPredicted RBP16■□□□□ 0.15
PTCH1-201ENST00000331920 ERVK-19Q9WJR5 959 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 UGT1A9O60656 530 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 UGT1A6P19224 532 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 UGT1A1P22309 533 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 UGT1A4P22310 534 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 TMEM69Q5SWH9 247 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 CRELD2Q6UXH1 353 aaPredicted RBP16■□□□□ 0.15
PTCH1-201ENST00000331920 ZC3HAV1Q7Z2W4 902 aaKnown RBP16■□□□□ 0.15
PTCH1-201ENST00000331920 C12orf65Q9H3J6 166 aaKnown RBP16■□□□□ 0.15
PTCH1-201ENST00000331920 UGT1A7Q9HAW7 530 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 UGT1A10Q9HAW8 530 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 UGT1A8Q9HAW9 530 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 SERTAD4Q9NUC0 356 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 PTBP2Q9UKA9 531 aaKnown RBP16■□□□□ 0.15
PTCH1-201ENST00000331920 FAM234BA2RU67 622 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 AGPSO00116 658 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 GRID2O43424 1007 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 FOXK1P85037 733 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 GALNT12Q8IXK2 581 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 ZNF619Q8N2I2 560 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 OR10Q1Q8NGQ4 319 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 SH3YL1Q96HL8 342 aaPredicted RBP16■□□□□ 0.15
PTCH1-201ENST00000331920 POT1Q9NUX5 634 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 MAP2P11137 1827 aaKnown RBP16■□□□□ 0.15
PTCH1-201ENST00000331920 NFATC1O95644 943 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 HOXB6P17509 224 aaKnown RBP16■□□□□ 0.15
PTCH1-201ENST00000331920 LSSP48449 732 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 GARNL3Q5VVW2 1013 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 TTPALQ9BTX7 342 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 PORCNQ9H237 461 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 SLC28A3Q9HAS3 691 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 ERVW-1Q9UQF0 538 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 CFL2Q9Y281 166 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 PBRM1Q86U86 1689 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 CELF3Q5SZQ8 465 aaKnown RBP16■□□□□ 0.15
PTCH1-201ENST00000331920 HACD2Q6Y1H2 254 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 ERI1Q8IV48 349 aaKnown RBP16■□□□□ 0.15
PTCH1-201ENST00000331920 PGAM4Q8N0Y7 254 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 OR10G2Q8NGC3 310 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 COL21A1Q96P44 957 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 DNTTIP1Q9H147 329 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 TTC37Q6PGP7 1564 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 SNTA1Q13424 505 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 C2orf27AQ580R0 203 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 ESAMQ96AP7 390 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 CRB1P82279 1406 aa16■□□□□ 0.15
PTCH1-201ENST00000331920 hCG_1818297A0A087WSY0 165 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 DDTLA6NHG4 134 aaPredicted RBP15.99■□□□□ 0.15
PTCH1-201ENST00000331920 NUDT6P53370 316 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 ZNF674Q2M3X9 581 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 CFAP77Q6ZQR2 320 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 ARNTL2Q8WYA1 636 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 MMABQ96EY8 250 aaPredicted RBP15.99■□□□□ 0.15
PTCH1-201ENST00000331920 MYRFLQ96LU7 910 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 ABCB8Q9NUT2 735 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 P2RX2Q9UBL9 471 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 UBQLN2Q9UHD9 624 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 PCDHGC4Q9Y5F7 938 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 C5orf60A6NFR6 353 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 H0Y8G0 127 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 M0R233 179 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 SOX1O00570 391 aaPredicted RBP15.99■□□□□ 0.15
PTCH1-201ENST00000331920 SOX14O95416 240 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 PRNPP04156 253 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 KLK1P06870 262 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 RPS3P23396 243 aaKnown RBP eCLIP15.99■□□□□ 0.15
PTCH1-201ENST00000331920 CDNFQ49AH0 187 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 ARL14Q8N4G2 192 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 ZNF781Q8N8C0 355 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 OR13C3Q8NGS6 347 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 LRRC46Q96FV0 321 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 SPATA31A3Q5VYP0 1347 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 TLR4O00206 839 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 FGF19O95750 216 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 PRKCGP05129 697 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 BRCC3P46736 316 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 RCBTB1Q8NDN9 531 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 GIMAP5Q96F15 307 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 MAB21L2Q9Y586 359 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 MATN2O00339 956 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 CDH15P55291 814 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 PARP15Q460N3 678 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 DPF1Q92782 380 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 HMCESQ96FZ2 354 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 ZNF578Q96N58 590 aaPredicted RBP15.99■□□□□ 0.15
PTCH1-201ENST00000331920 PURBQ96QR8 312 aaKnown RBP15.99■□□□□ 0.15
PTCH1-201ENST00000331920 KIF20BQ96Q89 1820 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 OR6C74A6NCV1 312 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 FOXO6A8MYZ6 492 aa15.99■□□□□ 0.15
PTCH1-201ENST00000331920 PCDH7O60245 1069 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms