RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ZNF551Q7Z340 670 aaPredicted RBP17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 UMODL1-AS1Q8N2C9 162 aa17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 TP53I13Q8NBR0 393 aaPredicted RBP17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 CLHC1Q8NHS4 586 aa17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 MYLPFQ96A32 169 aa17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 RMDN1Q96DB5 314 aa17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 THUMPD1Q9NXG2 353 aaKnown RBP17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 TOR4AQ9NXH8 423 aa17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 TRMT6Q9UJA5 497 aaKnown RBP17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 DNMT3LQ9UJW3 386 aa17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 C12orf71A8MTZ7 269 aa17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 VPS26AO75436 327 aa17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 RAP1GAP2Q684P5 730 aa17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 SUSD1Q6UWL2 747 aa17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 MCCC1Q96RQ3 725 aaPredicted RBP17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 INPP5KQ9BT40 448 aa17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 BEX2Q9BXY8 128 aa17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 GABARAPL3Q9BY60 117 aa17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 RUBCNLQ9H714 662 aa17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 SERHLQ9NQF3 203 aa17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 GPR83Q9NYM4 423 aa17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 NUDT4Q9NZJ9 180 aa17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 UBA2Q9UBT2 640 aaPredicted RBP17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 KLHL20Q9Y2M5 609 aa17.16■□□□□ 0.34
CDKN1B-201ENST00000228872 CASTOR2A6NHX0 329 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 RGS14O43566 566 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 MYCP01106 439 aaPredicted RBP17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 HSMCR30P0CW71 290 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 NUDT6P53370 316 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 IL2P60568 153 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 HMGCS1Q01581 520 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 MAD2L1Q13257 205 aaPredicted RBP17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 GTF2H2Q13888 395 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 PCBP2Q15366 365 aaKnown RBP eCLIP17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 BAK1Q16611 211 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 ZMAT1Q5H9K5 638 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 CACHD1Q5VU97 1274 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 GTF2H2CQ6P1K8 395 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 VTCN1Q7Z7D3 282 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 CACTIN-AS1Q8N1I8 211 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 NATD1Q8N6N6 113 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 KCNC2Q96PR1 638 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 SEMA3CQ99985 751 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 PAAF1Q9BRP4 392 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 KCNH6Q9H252 994 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 REEP1Q9H902 201 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 DYRK4Q9NR20 520 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 ASAH2Q9NR71 780 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 FNIP2Q9P278 1114 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 RIMKLBQ9ULI2 386 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 V9GYH0 126 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 LINC00854A0A1B0GVQ3 168 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 CPNE3O75131 537 aaKnown RBP17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 ZNF780AO75290 641 aaPredicted RBP17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 PIK3CGP48736 1102 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 CYP4F2P78329 520 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 TP53BP2Q13625 1128 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 KIAA1841Q6NSI8 718 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 MILR1Q7Z6M3 343 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 GALNT10Q86SR1 603 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 ZSWIM9Q86XI8 627 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 TMEM132CQ8N3T6 1108 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 DNAJB8Q8NHS0 232 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 SCAMP5Q8TAC9 235 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 CD200R1Q8TD46 325 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 COQ7Q99807 217 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 ADAM2Q99965 735 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 ZNF717Q9BY31 904 aaPredicted RBP17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 C3orf14Q9HBI5 128 aa17.15■□□□□ 0.34
CDKN1B-201ENST00000228872 OTCP00480 354 aa17.14■□□□□ 0.34
CDKN1B-201ENST00000228872 HOXB9P17482 250 aaPredicted RBP17.14■□□□□ 0.34
CDKN1B-201ENST00000228872 M6PRP20645 277 aa17.14■□□□□ 0.34
CDKN1B-201ENST00000228872 GGT2P36268 569 aa17.14■□□□□ 0.34
CDKN1B-201ENST00000228872 CDKN1CP49918 316 aaPredicted RBP17.14■□□□□ 0.34
CDKN1B-201ENST00000228872 OLR1P78380 273 aa17.14■□□□□ 0.34
CDKN1B-201ENST00000228872 INO80DQ53TQ3 878 aaPredicted RBP17.14■□□□□ 0.34
CDKN1B-201ENST00000228872 TOR1AIP1Q5JTV8 583 aa17.14■□□□□ 0.34
CDKN1B-201ENST00000228872 STX19Q8N4C7 294 aa17.14■□□□□ 0.34
CDKN1B-201ENST00000228872 ZFAND1Q8TCF1 268 aa17.14■□□□□ 0.34
CDKN1B-201ENST00000228872 SNAPC3Q92966 411 aa17.14■□□□□ 0.34
CDKN1B-201ENST00000228872 MAP6Q96JE9 813 aa17.14■□□□□ 0.34
CDKN1B-201ENST00000228872 OLA1Q9NTK5 396 aaKnown RBP17.14■□□□□ 0.34
CDKN1B-201ENST00000228872 ZNF490Q9ULM2 529 aaPredicted RBP17.14■□□□□ 0.34
CDKN1B-201ENST00000228872 PKMP14618 531 aaKnown RBP17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 CD72P21854 359 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 PGFP49763 221 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 CD83Q01151 205 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 SLC14A1Q13336 389 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 C10orf62Q5T681 223 aaPredicted RBP17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 PIK3R6Q5UE93 754 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 AFTPHQ6ULP2 937 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 TMEM86AQ8N2M4 240 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 ASB15Q8WXK1 588 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 TRIM62Q9BVG3 475 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 IPPKQ9H8X2 491 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 FARSBQ9NSD9 589 aaKnown RBP17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 NLE1Q9NVX2 485 aaPredicted RBP17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 MAN2B2Q9Y2E5 1009 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 A0A1W2PQ09 198 aa17.14■□□□□ 0.33
CDKN1B-201ENST00000228872 FFAR3O14843 346 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms