RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	SUZ12	Q15022	739 aa	Known RBP	11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	UPP1	Q16831	310 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GPAT3	Q53EU6	434 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MS4A13	Q5J8X5	152 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GNAS	Q5JWF2	1037 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SPANXN4	Q5MJ08	99 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	TMEM201	Q5SNT2	666 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SLC25A30	Q5SVS4	291 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	TMEM236	Q5W0B7	351 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ZDHHC20	Q5W0Z9	365 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	TWF2	Q6IBS0	349 aa	Known RBP	11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	AHSA2	Q719I0	299 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CHST9	Q7L1S5	443 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	VASH1	Q7L8A9	365 aa	Predicted RBP	11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GPR155	Q7Z3F1	870 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SYTL1	Q8IYJ3	562 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	LIX1	Q8N485	282 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PLA2G15	Q8NCC3	412 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	OR6J1	Q8NGC5	347 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	OR10T2	Q8NGX3	314 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	NETO1	Q8TDF5	533 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	BTN2A2	Q8WVV5	523 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	JPH3	Q8WXH2	748 aa	Predicted RBP	11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SLC7A6	Q92536	515 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SUSD3	Q96L08	255 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	FRMD6	Q96NE9	622 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	OSMR	Q99650	979 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	DOHH	Q9BU89	302 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	TAPBPL	Q9BX59	468 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	TNKS2	Q9H2K2	1166 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ATXN3L	Q9H3M9	355 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	NT5DC2	Q9H857	520 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CARS2	Q9HA77	564 aa	Known RBP	11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	RPRD1B	Q9NQG5	326 aa	Known RBP	11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ACOXL	Q9NUZ1	547 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CLN6	Q9NWW5	311 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	IMPAD1	Q9NX62	359 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	FBXL12	Q9NXK8	326 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SH3BP4	Q9P0V3	963 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	RABL2A	Q9UBK7	228 aa	Predicted RBP	11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ADAM30	Q9UKF2	790 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PCDHB8	Q9UN66	801 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	RABL2B	Q9UNT1	228 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PCDHGB7	Q9Y5F8	929 aa		11.41	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MEIOC	A2RUB1	952 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	FAM170B	A6NMN3	283 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	NT5C1B-RDH14	C9J2C7	533 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	TMEM189-UBE2V1	I3L0A0	370 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	KPNA5	O15131	536 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	RB1	P06400	928 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PGK2	P07205	417 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	C8G	P07360	202 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ANXA5	P08758	320 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ADORA3	P0DMS8	318 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	BCKDHA	P12694	445 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	DPEP1	P16444	411 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PFKL	P17858	780 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CR2	P20023	1033 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	IST1	P53990	364 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CDH4	P55283	916 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	P2RX3	P56373	397 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SMIM11A	P58511	58 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CD300C	Q08708	224 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	HSPA14	Q0VDF9	509 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SIM2	Q14190	667 aa	Predicted RBP	11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ABRAXAS2	Q15018	415 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	TMEM44	Q2T9K0	475 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CEP78	Q5JTW2	689 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	OR4F3	Q6IEY1	312 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SBSN	Q6UWP8	590 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MACC1	Q6ZN28	852 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	TMEM179B	Q7Z7N9	219 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CBARP	Q8N350	705 aa	Predicted RBP	11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	FAM109A	Q8N4B1	249 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	L3MBTL4	Q8NA19	623 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	NETO2	Q8NC67	525 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	C11orf65	Q8NCR3	313 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	DUSP18	Q8NEJ0	188 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GGH	Q92820	318 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PSMG2	Q969U7	264 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	RADIL	Q96JH8	1075 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ACOX2	Q99424	681 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	TMEM246	Q9BRR3	403 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MCOLN1	Q9GZU1	580 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MKRN2	Q9H000	416 aa	Known RBP	11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	RNF38	Q9H0F5	515 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SLC32A1	Q9H598	525 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SMURF1	Q9HCE7	757 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	TLR8	Q9NR97	1041 aa	Known RBP	11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ZNF275	Q9NSD4	429 aa	Predicted RBP	11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ZNF282	Q9UDV7	671 aa	Predicted RBP	11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GIMAP2	Q9UG22	337 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	FAM50B	Q9Y247	325 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MAGED1	Q9Y5V3	778 aa	Predicted RBP	11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	RNF215	Q9Y6U7	377 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236		V9GYQ6	96 aa		11.4	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	BRWD3	Q6RI45	1802 aa		11.39	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	MAGEB17	A8MXT2	336 aa		11.39	□□□□□ -0.59
U2AF1L4-221	ENST00000601236	ZNF670-ZNF695	F2Z2N8	137 aa		11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms