RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 SP140Q13342 867 aa21.34■■□□□ 1.01
GTF2F1-204ENST00000594965 TRADDQ15628 312 aa21.34■■□□□ 1.01
GTF2F1-204ENST00000594965 TMEM207Q6UWW9 146 aa21.34■■□□□ 1.01
GTF2F1-204ENST00000594965 COX15Q7KZN9 410 aa21.34■■□□□ 1.01
GTF2F1-204ENST00000594965 ZC3HC1Q86WB0 502 aaKnown RBP21.34■■□□□ 1.01
GTF2F1-204ENST00000594965 MYO1HQ8N1T3 1032 aa21.34■■□□□ 1.01
GTF2F1-204ENST00000594965 TTC29Q8NA56 475 aaPredicted RBP21.34■■□□□ 1.01
GTF2F1-204ENST00000594965 MCOLN3Q8TDD5 553 aa21.34■■□□□ 1.01
GTF2F1-204ENST00000594965 CCDC138Q96M89 665 aa21.34■■□□□ 1.01
GTF2F1-204ENST00000594965 MCMBPQ9BTE3 642 aa21.34■■□□□ 1.01
GTF2F1-204ENST00000594965 PARVBQ9HBI1 364 aa21.34■■□□□ 1.01
GTF2F1-204ENST00000594965 SAYSD1Q9NPB0 183 aa21.34■■□□□ 1.01
GTF2F1-204ENST00000594965 ABCF3Q9NUQ8 709 aa21.34■■□□□ 1.01
GTF2F1-204ENST00000594965 CUEDC1Q9NWM3 386 aaPredicted RBP21.34■■□□□ 1.01
GTF2F1-204ENST00000594965 ZFATQ9P243 1243 aa21.34■■□□□ 1.01
GTF2F1-204ENST00000594965 NDOR1Q9UHB4 597 aa21.34■■□□□ 1.01
GTF2F1-204ENST00000594965 GPN3Q9UHW5 284 aaPredicted RBP21.34■■□□□ 1.01
GTF2F1-204ENST00000594965 IKZF3Q9UKT9 509 aa21.34■■□□□ 1.01
GTF2F1-204ENST00000594965 TP53TG5Q9Y2B4 290 aa21.34■■□□□ 1.01
GTF2F1-204ENST00000594965 PTRH2Q9Y3E5 179 aaKnown RBP21.34■■□□□ 1.01
GTF2F1-204ENST00000594965 BAHCC1Q9P281 2608 aa21.33■■□□□ 1.01
GTF2F1-204ENST00000594965 HYKKA2RU49 373 aa21.33■■□□□ 1.01
GTF2F1-204ENST00000594965 H0YGG7 62 aa21.33■■□□□ 1.01
GTF2F1-204ENST00000594965 SLC28A2O43868 658 aa21.33■■□□□ 1.01
GTF2F1-204ENST00000594965 CCNDBP1O95273 360 aa21.33■■□□□ 1.01
GTF2F1-204ENST00000594965 SSTR1P30872 391 aa21.33■■□□□ 1.01
GTF2F1-204ENST00000594965 ARF3P61204 181 aaPredicted RBP21.33■■□□□ 1.01
GTF2F1-204ENST00000594965 PDAP1Q13442 181 aaKnown RBP21.33■■□□□ 1.01
GTF2F1-204ENST00000594965 ZXDCQ2QGD7 858 aaPredicted RBP21.33■■□□□ 1.01
GTF2F1-204ENST00000594965 PRTGQ2VWP7 1150 aa21.33■■□□□ 1.01
GTF2F1-204ENST00000594965 CAPN12Q6ZSI9 719 aa21.33■■□□□ 1.01
GTF2F1-204ENST00000594965 STRA8Q7Z7C7 330 aa21.33■■□□□ 1.01
GTF2F1-204ENST00000594965 SLC26A11Q86WA9 606 aa21.33■■□□□ 1.01
GTF2F1-204ENST00000594965 ING2Q9H160 280 aa21.33■■□□□ 1.01
GTF2F1-204ENST00000594965 HEMK1Q9Y5R4 338 aaPredicted RBP21.33■■□□□ 1.01
GTF2F1-204ENST00000594965 MKRN2OSH3BPM6 223 aa21.32■■□□□ 1
GTF2F1-204ENST00000594965 EIF3HO15372 352 aaKnown RBP eCLIP21.32■■□□□ 1
GTF2F1-204ENST00000594965 PIAS1O75925 651 aa21.32■■□□□ 1
GTF2F1-204ENST00000594965 PDGFAP04085 211 aa21.32■■□□□ 1
GTF2F1-204ENST00000594965 OR1D4P47884 311 aa21.32■■□□□ 1
GTF2F1-204ENST00000594965 IL2P60568 153 aa21.32■■□□□ 1
GTF2F1-204ENST00000594965 TBPL1P62380 186 aa21.32■■□□□ 1
GTF2F1-204ENST00000594965 ABATP80404 500 aa21.32■■□□□ 1
GTF2F1-204ENST00000594965 SSPNQ14714 243 aa21.32■■□□□ 1
GTF2F1-204ENST00000594965 FAM214AQ32MH5 1076 aa21.32■■□□□ 1
GTF2F1-204ENST00000594965 LACTB2Q53H82 288 aaPredicted RBP21.32■■□□□ 1
GTF2F1-204ENST00000594965 TCTN3Q6NUS6 607 aa21.32■■□□□ 1
GTF2F1-204ENST00000594965 PRICKLE2Q7Z3G6 844 aa21.32■■□□□ 1
GTF2F1-204ENST00000594965 METTL27Q8N6F8 245 aaPredicted RBP21.32■■□□□ 1
GTF2F1-204ENST00000594965 OR2Y1Q8NGV0 311 aa21.32■■□□□ 1
GTF2F1-204ENST00000594965 PYROXD1Q8WU10 500 aa21.32■■□□□ 1
GTF2F1-204ENST00000594965 C10orf90Q96M02 699 aa21.32■■□□□ 1
GTF2F1-204ENST00000594965 C16orf45Q96MC5 204 aaPredicted RBP21.32■■□□□ 1
GTF2F1-204ENST00000594965 OR2A5Q96R48 311 aa21.32■■□□□ 1
GTF2F1-204ENST00000594965 SH2B3Q9UQQ2 575 aa21.32■■□□□ 1
GTF2F1-204ENST00000594965 FAM95CA0A1B0GW59 222 aa21.31■■□□□ 1
GTF2F1-204ENST00000594965 EIF2S1P05198 315 aaKnown RBP21.31■■□□□ 1
GTF2F1-204ENST00000594965 UMODP07911 640 aa21.31■■□□□ 1
GTF2F1-204ENST00000594965 CD63P08962 238 aa21.31■■□□□ 1
GTF2F1-204ENST00000594965 OTX2P32243 289 aa21.31■■□□□ 1
GTF2F1-204ENST00000594965 FOLR3P41439 243 aa21.31■■□□□ 1
GTF2F1-204ENST00000594965 RELAQ04206 551 aa21.31■■□□□ 1
GTF2F1-204ENST00000594965 ATP1A4Q13733 1029 aa21.31■■□□□ 1
GTF2F1-204ENST00000594965 AGTRAPQ6RW13 159 aa21.31■■□□□ 1
GTF2F1-204ENST00000594965 ZDHHC24Q6UX98 284 aa21.31■■□□□ 1
GTF2F1-204ENST00000594965 OVCH1Q7RTY7 1134 aa21.31■■□□□ 1
GTF2F1-204ENST00000594965 PALM2Q8IXS6 379 aa21.31■■□□□ 1
GTF2F1-204ENST00000594965 FKBP10Q96AY3 582 aa21.31■■□□□ 1
GTF2F1-204ENST00000594965 ATG10Q9H0Y0 220 aa21.31■■□□□ 1
GTF2F1-204ENST00000594965 CCDC177Q9NQR7 707 aaPredicted RBP21.31■■□□□ 1
GTF2F1-204ENST00000594965 ACSS2Q9NR19 701 aa21.31■■□□□ 1
GTF2F1-204ENST00000594965 CDC23Q9UJX2 597 aa21.31■■□□□ 1
GTF2F1-204ENST00000594965 UTP11Q9Y3A2 253 aaKnown RBP21.31■■□□□ 1
GTF2F1-204ENST00000594965 CXorf49A8MYA2 514 aaPredicted RBP21.3■■□□□ 1
GTF2F1-204ENST00000594965 H7BY64 318 aa21.3■■□□□ 1
GTF2F1-204ENST00000594965 PYCARD-AS1I3L0S3 204 aa21.3■■□□□ 1
GTF2F1-204ENST00000594965 HAT1O14929 419 aa21.3■■□□□ 1
GTF2F1-204ENST00000594965 C1QAP02745 245 aa21.3■■□□□ 1
GTF2F1-204ENST00000594965 ZNF37AP17032 561 aaPredicted RBP21.3■■□□□ 1
GTF2F1-204ENST00000594965 CCL11P51671 97 aa21.3■■□□□ 1
GTF2F1-204ENST00000594965 PLTPP55058 493 aa21.3■■□□□ 1
GTF2F1-204ENST00000594965 ZNF460Q14592 562 aa21.3■■□□□ 1
GTF2F1-204ENST00000594965 THEMIS2Q5TEJ8 643 aa21.3■■□□□ 1
GTF2F1-204ENST00000594965 PRAMEF13Q5VWM6 474 aa21.3■■□□□ 1
GTF2F1-204ENST00000594965 MRGPREQ86SM8 312 aa21.3■■□□□ 1
GTF2F1-204ENST00000594965 RAB43Q86YS6 212 aa21.3■■□□□ 1
GTF2F1-204ENST00000594965 ARHGEF39Q8N4T4 335 aa21.3■■□□□ 1
GTF2F1-204ENST00000594965 FBXO25Q8TCJ0 367 aa21.3■■□□□ 1
GTF2F1-204ENST00000594965 PTERQ96BW5 349 aa21.3■■□□□ 1
GTF2F1-204ENST00000594965 PDLIM5Q96HC4 596 aaKnown RBP21.3■■□□□ 1
GTF2F1-204ENST00000594965 PRAP1Q96NZ9 151 aa21.3■■□□□ 1
GTF2F1-204ENST00000594965 SPSB2Q99619 263 aa21.3■■□□□ 1
GTF2F1-204ENST00000594965 SGPP1Q9BX95 441 aa21.3■■□□□ 1
GTF2F1-204ENST00000594965 RAB17Q9H0T7 212 aa21.3■■□□□ 1
GTF2F1-204ENST00000594965 SLC26A1Q9H2B4 701 aa21.3■■□□□ 1
GTF2F1-204ENST00000594965 MAU2Q9Y6X3 613 aa21.3■■□□□ 1
GTF2F1-204ENST00000594965 J3QKU1 62 aa21.29■■□□□ 1
GTF2F1-204ENST00000594965 CEACAM4O75871 244 aa21.29■■□□□ 1
GTF2F1-204ENST00000594965 ALBP02768 609 aa21.29■■□□□ 1
GTF2F1-204ENST00000594965 EZRP15311 586 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms