RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 LINC01555Q8NAE3 123 aa16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 PPP4R1Q8TF05 950 aa16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 SKA2Q8WVK7 121 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 SLC22A18Q96BI1 424 aa16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 CERS2Q96G23 380 aa16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 PWWP2AQ96N64 755 aa16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 WDR77Q9BQA1 342 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 SLC26A1Q9H2B4 701 aa16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 FBXO6Q9NRD1 293 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 KLHL42Q9P2K6 505 aa16.81■□□□□ 0.28
SHKBP1-203ENST00000594298 CTAGE15A4D2H0 777 aa16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 NIPSNAP2O75323 286 aa16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 CTAGE8P0CG41 777 aa16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 ERVK-10P10266 1014 aa16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 PIM1P11309 404 aaPredicted RBP16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 CD9P21926 228 aa16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 ALAS2P22557 587 aa16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 ATP5DP30049 168 aa16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 GLRBP48167 497 aa16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 CARSP49589 748 aaKnown RBP16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 ELOAQ14241 798 aaKnown RBP16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 HP1BP3Q5SSJ5 553 aaPredicted RBP16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 YOD1Q5VVQ6 348 aaPredicted RBP16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 PRAMEF13Q5VWM6 474 aa16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 STEAP4Q687X5 459 aa16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 ZNF787Q6DD87 383 aa16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 UGT3A1Q6NUS8 523 aa16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 CTAGE6Q86UF2 777 aa16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 CTAGE4Q8IX94 777 aa16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 FAM20CQ8IXL6 584 aa16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 C2CD4AQ8NCU7 369 aaPredicted RBP16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 ST6GALNAC3Q8NDV1 305 aa16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 FBXO36Q8NEA4 188 aa16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 MAGEC3Q8TD91 643 aa16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 AGPAT4Q9NRZ5 378 aa16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 FBXL4Q9UKA2 621 aa16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 NTNG1Q9Y2I2 539 aa16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 RP1L1Q8IWN7 2480 aaPredicted RBP16.8■□□□□ 0.28
SHKBP1-203ENST00000594298 NOTCH2Q04721 2471 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 SOCS6O14544 535 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 TP73O15350 636 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 HAUS5O94927 633 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 ITGA3P26006 1051 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 COL8A1P27658 744 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 PLTPP55058 493 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 GRB7Q14451 532 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 NKG7Q16617 165 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 ZC3H12BQ5HYM0 836 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 TTLL10Q6ZVT0 673 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 GALNT7Q86SF2 657 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 ANKMY2Q8IV38 441 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 VRK3Q8IV63 474 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 DCUN1D3Q8IWE4 304 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 CNTN4Q8IWV2 1026 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 PALM2Q8IXS6 379 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 ZBED8Q8IZ13 594 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 RAB42Q8N4Z0 105 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 CFAP61Q8NHU2 1237 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 PYROXD1Q8WU10 500 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 KCNJ9Q92806 393 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 ZNF285Q96NJ3 590 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 SPSB2Q99619 263 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 PHACTR1Q9C0D0 580 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 SLC6A20Q9NP91 592 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 INTS7Q9NVH2 962 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 NXT1Q9UKK6 140 aaKnown RBP16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 KLHL20Q9Y2M5 609 aa16.79■□□□□ 0.28
SHKBP1-203ENST00000594298 SEC16AO15027 2179 aa16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 FER1L5A0AVI2 2057 aa16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 DSCR3O14972 297 aa16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 VPS26AO75436 327 aa16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 ATXN8OSP0DMR3 200 aa16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 CCNFP41002 786 aa16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 SKIV2L2P42285 1042 aaKnown RBP16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 MPP1Q00013 466 aa16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 ILF2Q12905 390 aaKnown RBP16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 GRM7Q14831 915 aa16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 TCTE1Q5JU00 501 aa16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 COX15Q7KZN9 410 aa16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 MMGT1Q8N4V1 131 aa16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 CEP112Q8N8E3 955 aa16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 OR2L8Q8NGY9 312 aa16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 LRRC1Q9BTT6 524 aa16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 SAYSD1Q9NPB0 183 aa16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 CUTCQ9NTM9 273 aa16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 GRHL1Q9NZI5 618 aa16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 NOVA2Q9UNW9 492 aaKnown RBP16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 CSAG2Q9Y5P2 127 aa16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 HS3ST3B1Q9Y662 390 aa16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 DOPEY1Q5JWR5 2465 aa16.78■□□□□ 0.28
SHKBP1-203ENST00000594298 FITM1A5D6W6 292 aa16.77■□□□□ 0.28
SHKBP1-203ENST00000594298 ENO4A6NNW6 628 aa16.77■□□□□ 0.28
SHKBP1-203ENST00000594298 FKBP9O95302 570 aa16.77■□□□□ 0.28
SHKBP1-203ENST00000594298 TSFMP43897 325 aaKnown RBP16.77■□□□□ 0.28
SHKBP1-203ENST00000594298 MGAT5Q09328 741 aa16.77■□□□□ 0.28
SHKBP1-203ENST00000594298 GLE1Q53GS7 698 aaKnown RBP16.77■□□□□ 0.28
SHKBP1-203ENST00000594298 TEDDM1Q5T9Z0 273 aa16.77■□□□□ 0.28
SHKBP1-203ENST00000594298 AGAP7PQ5VUJ5 663 aa16.77■□□□□ 0.28
SHKBP1-203ENST00000594298 FCRL6Q6DN72 434 aa16.77■□□□□ 0.28
SHKBP1-203ENST00000594298 CNSTQ6PJW8 725 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms