RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 IFT27Q9BW83 186 aa11.66□□□□□ -0.54
NEK9-210ENST00000557026 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.66□□□□□ -0.54
NEK9-210ENST00000557026 AHDC1Q5TGY3 1603 aaPredicted RBP11.65□□□□□ -0.54
NEK9-210ENST00000557026 ATP6AP2A0A1C7CYW4 349 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 A0A1W2PRG6 482 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 ZNF670-ZNF695F2Z2N8 137 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 RNGTTO60942 597 aaKnown RBP11.65□□□□□ -0.54
NEK9-210ENST00000557026 PGLSO95336 258 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 VNN1O95497 513 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 RAP2AP10114 183 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 THRBP10828 461 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 HGSNATQ68CP4 663 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 Q6ZVU0 165 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 NANOGNBQ7Z5D8 188 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 SLC22A15Q8IZD6 547 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 PQLC1Q8N2U9 271 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 LRRC3Q9BY71 257 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 CCSER2Q9H7U1 834 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 ACP6Q9NPH0 428 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 PRTFDC1Q9NRG1 225 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 TSC22D4Q9Y3Q8 395 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 LOC100506127A0A0U1RQW1 187 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 ANXA2P2A6NMY6 339 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 TOR1BO14657 336 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 CAPN5O15484 640 aaPredicted RBP11.65□□□□□ -0.54
NEK9-210ENST00000557026 PSIP1O75475 530 aaKnown RBP11.65□□□□□ -0.54
NEK9-210ENST00000557026 ANXA2P07355 339 aaKnown RBP11.65□□□□□ -0.54
NEK9-210ENST00000557026 MARCKSL1P49006 195 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 SLC10A7Q0GE19 358 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 TLR1Q15399 786 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 UPP1Q16831 310 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 SLC9A4Q6AI14 798 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 THOC7Q6I9Y2 204 aaKnown RBP11.65□□□□□ -0.54
NEK9-210ENST00000557026 METTL2BQ6P1Q9 378 aaKnown RBP11.65□□□□□ -0.54
NEK9-210ENST00000557026 HS6ST2Q96MM7 605 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 IFT46Q9NQC8 304 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 ZNF879B4DU55 563 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 CDC7O00311 574 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 NDUFS4O43181 175 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 SSNA1O43805 119 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 RLN2P04090 185 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 MMP2P08253 660 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 DRD2P14416 443 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 NMBRP28336 390 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 ATP4BP51164 291 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 CTBP2P56545 445 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 PYDC2Q56P42 97 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 KIAA0895LQ68EN5 471 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 OR4K14Q8NGD5 310 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 SMPD3Q9NY59 655 aaPredicted RBP11.65□□□□□ -0.54
NEK9-210ENST00000557026 EIF2B4Q9UI10 523 aaKnown RBP11.65□□□□□ -0.54
NEK9-210ENST00000557026 MAU2Q9Y6X3 613 aa11.65□□□□□ -0.54
NEK9-210ENST00000557026 ROBO1Q9Y6N7 1651 aa11.65□□□□□ -0.55
NEK9-210ENST00000557026 CXCR6O00574 342 aa11.65□□□□□ -0.55
NEK9-210ENST00000557026 MATN1P21941 496 aa11.65□□□□□ -0.55
NEK9-210ENST00000557026 SLC6A6P31641 620 aa11.65□□□□□ -0.55
NEK9-210ENST00000557026 GK3PQ14409 553 aa11.65□□□□□ -0.55
NEK9-210ENST00000557026 PLEKHG4Q58EX7 1191 aa11.65□□□□□ -0.55
NEK9-210ENST00000557026 ARL13AQ5H913 290 aaPredicted RBP11.65□□□□□ -0.55
NEK9-210ENST00000557026 SCML4Q8N228 414 aa11.65□□□□□ -0.55
NEK9-210ENST00000557026 LPGAT1Q92604 370 aa11.65□□□□□ -0.55
NEK9-210ENST00000557026 LENG1Q96BZ8 264 aaPredicted RBP11.65□□□□□ -0.55
NEK9-210ENST00000557026 ADAMTS10Q9H324 1103 aa11.65□□□□□ -0.55
NEK9-210ENST00000557026 TRPV5Q9NQA5 729 aa11.65□□□□□ -0.55
NEK9-210ENST00000557026 C15orf41Q9Y2V0 281 aa11.65□□□□□ -0.55
NEK9-210ENST00000557026 ARL6IP5O75915 188 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 HLA-DQB2P05538 268 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 GJA1P17302 382 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 HOXB9P17482 250 aaPredicted RBP11.64□□□□□ -0.55
NEK9-210ENST00000557026 HSD11B1P28845 292 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 GSSP48637 474 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 MPP1Q00013 466 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 RBBP4Q09028 425 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 ASPGQ86U10 573 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 GPAT4Q86UL3 456 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 SLC15A3Q8IY34 581 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 SPATA22Q8NHS9 363 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 SCAMP5Q8TAC9 235 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 CCDC107Q8WV48 283 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 PIGKQ92643 395 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 UFD1Q92890 307 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 NLGN3Q9NZ94 848 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 ZCCHC18P0CG32 403 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 ANPEPP15144 967 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 SLC15A1P46059 708 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 MTTPP55157 894 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 TAS2R39P59534 338 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 MRPS21P82921 87 aaKnown RBP11.64□□□□□ -0.55
NEK9-210ENST00000557026 SCARB2Q14108 478 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 SERTAD2Q14140 314 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 DUOXA1Q1HG43 343 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 MPP7Q5T2T1 576 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 CHRDL2Q6WN34 429 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 ALDH16A1Q8IZ83 802 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 MEIOBQ8N635 442 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 LRRC57Q8N9N7 239 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 GSTCDQ8NEC7 633 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 TRIB2Q92519 343 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 SLC39A3Q9BRY0 314 aa11.64□□□□□ -0.55
NEK9-210ENST00000557026 CD320Q9NPF0 282 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms