RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 GBP5Q96PP8 586 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 FMO2Q99518 471 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 GPR22Q99680 433 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 ZFYVE21Q9BQ24 234 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 PLCD4Q9BRC7 762 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 GPR87Q9BY21 358 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 TRIM54Q9BYV2 358 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 UNKQ9C0B0 810 aaKnown RBP11.33□□□□□ -0.6
RAB5C-204ENST00000547517 ATG10Q9H0Y0 220 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 POPDC3Q9HBV1 291 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 CUEDC1Q9NWM3 386 aaPredicted RBP11.33□□□□□ -0.6
RAB5C-204ENST00000547517 UTP6Q9NYH9 597 aaKnown RBP11.33□□□□□ -0.6
RAB5C-204ENST00000547517 NINJ2Q9NZG7 142 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 ANKMY1Q9P2S6 941 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 NDOR1Q9UHB4 597 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 MTO1Q9Y2Z2 717 aaKnown RBP11.33□□□□□ -0.6
RAB5C-204ENST00000547517 SPTBP11277 2137 aa11.33□□□□□ -0.6
RAB5C-204ENST00000547517 SMG1Q96Q15 3661 aaKnown RBP11.33□□□□□ -0.6
RAB5C-204ENST00000547517 LOC105369274A0A096LPK9 316 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 LOC102723532A0A0G2JNH3 316 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 CDC7O00311 574 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 ENO2P09104 434 aaPredicted RBP11.32□□□□□ -0.6
RAB5C-204ENST00000547517 FURINP09958 794 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 EZRP15311 586 aaKnown RBP11.32□□□□□ -0.6
RAB5C-204ENST00000547517 ECHS1P30084 290 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 AP1S2P56377 157 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 ABATP80404 500 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 NAB1Q13506 487 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 NAE1Q13564 534 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 IL10RAQ13651 578 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 GRM7Q14831 915 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 PPP1R3AQ16821 1122 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 DEFB109BQ30KR1 87 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 GLE1Q53GS7 698 aaKnown RBP11.32□□□□□ -0.6
RAB5C-204ENST00000547517 TCTE1Q5JU00 501 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 ZNF425Q6IV72 752 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 SBSNQ6UWP8 590 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 CEP128Q6ZU80 1094 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 TTLL10Q6ZVT0 673 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 FRA10AC1Q70Z53 315 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 CYS1Q717R9 158 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 SYVN1Q86TM6 617 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 PAQR7Q86WK9 346 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 OR4N4Q8N0Y3 316 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 METTL27Q8N6F8 245 aaPredicted RBP11.32□□□□□ -0.6
RAB5C-204ENST00000547517 ANKRD49Q8WVL7 239 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 MRRFQ96E11 262 aaKnown RBP11.32□□□□□ -0.6
RAB5C-204ENST00000547517 PDLIM5Q96HC4 596 aaKnown RBP11.32□□□□□ -0.6
RAB5C-204ENST00000547517 DPH2Q9BQC3 489 aaPredicted RBP11.32□□□□□ -0.6
RAB5C-204ENST00000547517 NLNQ9BYT8 704 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 FAM129AQ9BZQ8 928 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 CUTCQ9NTM9 273 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 SNX7Q9UNH6 387 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 SH2B3Q9UQQ2 575 aa11.32□□□□□ -0.6
RAB5C-204ENST00000547517 FARSAQ9Y285 508 aaKnown RBP11.32□□□□□ -0.6
RAB5C-204ENST00000547517 A0A1B0GX78 115 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 H0YGG7 62 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 HAT1O14929 419 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 ACSL3O95573 720 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 CAPN1P07384 714 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 RAB40ALP0C0E4 278 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 STMN1P16949 149 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 ALAS2P22557 587 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 PHBP35232 272 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 SPRP35270 261 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-204ENST00000547517 GCGRP47871 477 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 ARSFP54793 590 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 POLE2P56282 527 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 ARF3P61204 181 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-204ENST00000547517 DCDP81605 110 aaKnown RBP11.31□□□□□ -0.6
RAB5C-204ENST00000547517 TSNQ15631 228 aaKnown RBP11.31□□□□□ -0.6
RAB5C-204ENST00000547517 UAP1Q16222 522 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-204ENST00000547517 UGT8Q16880 541 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 CRTC2Q53ET0 693 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-204ENST00000547517 WASHC2DQ5SRD0 308 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 GRTP1Q5TC63 336 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 MLIPQ5VWP3 458 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 CAPN13Q6MZZ7 669 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-204ENST00000547517 ADAMTSL2Q86TH1 951 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 PLD3Q8IV08 490 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 SPATA6LQ8N4H0 392 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 DTWD1Q8N5C7 304 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 CSNK1A1LQ8N752 337 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 RERGQ96A58 199 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-204ENST00000547517 PYCR2Q96C36 320 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 FBXL8Q96CD0 374 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 WBP1Q96G27 269 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 ZNF285Q96NJ3 590 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 EGFL8Q99944 293 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 C17orf62Q9BQA9 187 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 SGPP1Q9BX95 441 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 SEMA4CQ9C0C4 833 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 PCBD2Q9H0N5 130 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 CDC42EP4Q9H3Q1 356 aaKnown RBP11.31□□□□□ -0.6
RAB5C-204ENST00000547517 SYNPO2LQ9H987 977 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 IFT80Q9P2H3 777 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-204ENST00000547517 CTNNAL1Q9UBT7 734 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 GPN3Q9UHW5 284 aaPredicted RBP11.31□□□□□ -0.6
RAB5C-204ENST00000547517 TCFL5Q9UL49 500 aa11.31□□□□□ -0.6
RAB5C-204ENST00000547517 NOVA2Q9UNW9 492 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms