RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 CIR1Q86X95 450 aaPredicted RBP17.09■□□□□ 0.33
RAB40C-205ENST00000539661 SCN4BQ8IWT1 228 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 GALNT12Q8IXK2 581 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 BEND7Q8N7W2 519 aaPredicted RBP17.09■□□□□ 0.33
RAB40C-205ENST00000539661 C9orf43Q8TAL5 461 aaPredicted RBP17.09■□□□□ 0.33
RAB40C-205ENST00000539661 HSH2DQ96JZ2 352 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 CEP19Q96LK0 163 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 CENPOQ9BU64 300 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 OLA1Q9NTK5 396 aaKnown RBP17.09■□□□□ 0.33
RAB40C-205ENST00000539661 TBC1D24Q9ULP9 559 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 AP1M2Q9Y6Q5 423 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 C17orf102A2RUQ5 167 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 STX7O15400 261 aaKnown RBP17.09■□□□□ 0.33
RAB40C-205ENST00000539661 AOC2O75106 756 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 SLITRK5O94991 958 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 PRLP01236 227 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 ITGA2P17301 1181 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 CDKN2CP42773 168 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 PIK3CGP48736 1102 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 RGS4P49798 205 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 EFEMP1Q12805 493 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 IRF3Q14653 427 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 BCL7AQ4VC05 210 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 PAN2Q504Q3 1202 aaKnown RBP17.09■□□□□ 0.33
RAB40C-205ENST00000539661 ZNF367Q7RTV3 350 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 SAPCD2Q86UD0 394 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 RAB43Q86YS6 212 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 ZZZ3Q8IYH5 903 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 Q96MT0 163 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 HHIPQ96QV1 700 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 OR2A14Q96R47 310 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 ZBED2Q9BTP6 218 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 CINPQ9BW66 212 aaPredicted RBP17.09■□□□□ 0.33
RAB40C-205ENST00000539661 GREB1Q4ZG55 1949 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 HMX3A6NHT5 357 aa17.08■□□□□ 0.33
RAB40C-205ENST00000539661 FAM25AB3EWG3 89 aa17.08■□□□□ 0.33
RAB40C-205ENST00000539661 FAM25CB3EWG5 89 aa17.08■□□□□ 0.33
RAB40C-205ENST00000539661 FAM25GB3EWG6 89 aa17.08■□□□□ 0.33
RAB40C-205ENST00000539661 KRT6AP02538 564 aa17.08■□□□□ 0.33
RAB40C-205ENST00000539661 KRT6BP04259 564 aa17.08■□□□□ 0.33
RAB40C-205ENST00000539661 TYMPP19971 482 aa17.08■□□□□ 0.33
RAB40C-205ENST00000539661 RPS5P46782 204 aaKnown RBP17.08■□□□□ 0.33
RAB40C-205ENST00000539661 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.08■□□□□ 0.33
RAB40C-205ENST00000539661 CACNB2Q08289 660 aaPredicted RBP17.08■□□□□ 0.33
RAB40C-205ENST00000539661 ZCCHC8Q6NZY4 707 aaKnown RBP17.08■□□□□ 0.33
RAB40C-205ENST00000539661 C19orf48Q6RUI8 117 aa17.08■□□□□ 0.33
RAB40C-205ENST00000539661 NPLOC4Q8TAT6 608 aa17.08■□□□□ 0.33
RAB40C-205ENST00000539661 ULK4Q96C45 1275 aa17.08■□□□□ 0.33
RAB40C-205ENST00000539661 CHCHD6Q9BRQ6 235 aa17.08■□□□□ 0.33
RAB40C-205ENST00000539661 WWOXQ9NZC7 414 aa17.08■□□□□ 0.33
RAB40C-205ENST00000539661 CPA4Q9UI42 421 aa17.08■□□□□ 0.33
RAB40C-205ENST00000539661 PCDHGB3Q9Y5G1 929 aa17.08■□□□□ 0.33
RAB40C-205ENST00000539661 IQCF5A8MTL0 148 aa17.08■□□□□ 0.32
RAB40C-205ENST00000539661 SEMA3DO95025 777 aa17.08■□□□□ 0.32
RAB40C-205ENST00000539661 KCNK5O95279 499 aa17.08■□□□□ 0.32
RAB40C-205ENST00000539661 MAPK1P28482 360 aa17.08■□□□□ 0.32
RAB40C-205ENST00000539661 CA5AP35218 305 aa17.08■□□□□ 0.32
RAB40C-205ENST00000539661 LDLRAD1Q5T700 205 aa17.08■□□□□ 0.32
RAB40C-205ENST00000539661 VTCN1Q7Z7D3 282 aa17.08■□□□□ 0.32
RAB40C-205ENST00000539661 GATAD2AQ86YP4 633 aa17.08■□□□□ 0.32
RAB40C-205ENST00000539661 CHTF18Q8WVB6 975 aa17.08■□□□□ 0.32
RAB40C-205ENST00000539661 NELL1Q92832 810 aa17.08■□□□□ 0.32
RAB40C-205ENST00000539661 TMEM246Q9BRR3 403 aa17.08■□□□□ 0.32
RAB40C-205ENST00000539661 MAGEH1Q9H213 219 aa17.08■□□□□ 0.32
RAB40C-205ENST00000539661 MAU2Q9Y6X3 613 aa17.08■□□□□ 0.32
RAB40C-205ENST00000539661 SSX4O60224 188 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 GUCA1CO95843 209 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 GPX2P18283 190 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 CR2P20023 1033 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 CD72P21854 359 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 HOXD9P28356 352 aaPredicted RBP17.07■□□□□ 0.32
RAB40C-205ENST00000539661 HNF4AP41235 474 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 CSTF3Q12996 717 aaKnown RBP17.07■□□□□ 0.32
RAB40C-205ENST00000539661 IQCCQ4KMZ1 466 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 SGO1Q5FBB7 561 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 C10orf62Q5T681 223 aaPredicted RBP17.07■□□□□ 0.32
RAB40C-205ENST00000539661 GPR153Q6NV75 609 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 USP50Q70EL3 339 aaPredicted RBP17.07■□□□□ 0.32
RAB40C-205ENST00000539661 MRPL10Q7Z7H8 261 aaKnown RBP17.07■□□□□ 0.32
RAB40C-205ENST00000539661 ANKRD46Q86W74 232 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 DEPDC4Q8N2C3 294 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 STX19Q8N4C7 294 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 DENND6BQ8NEG7 585 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 EGFL8Q99944 293 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 RNF167Q9H6Y7 350 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 DYRK4Q9NR20 520 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 ST3GAL5Q9UNP4 418 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 VIPP01282 170 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 EPB42P16452 691 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 CACNG1Q06432 222 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 SLC14A1Q13336 389 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 VEZF1Q14119 521 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 NXNL2Q5VZ03 156 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 NRARPQ7Z6K4 114 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 CYP4Z2PQ8N1L4 340 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 TCAIMQ8N3R3 496 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 LPCAT1Q8NF37 534 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 SUSD3Q96L08 255 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 GDF15Q99988 308 aa17.07■□□□□ 0.32
RAB40C-205ENST00000539661 ADGRE3Q9BY15 652 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms