RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 FRMPD2BQ6IN97 320 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 CAPN13Q6MZZ7 669 aaPredicted RBP13.03□□□□□ -0.32
FDPS-219ENST00000495308 ADGRD1Q6QNK2 874 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 C19orf48Q6RUI8 117 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 C6orf15Q6UXA7 325 aaPredicted RBP13.03□□□□□ -0.32
FDPS-219ENST00000495308 PAQR7Q86WK9 346 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 GPSM1Q86YR5 675 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 MCATQ8IVS2 390 aaKnown RBP13.03□□□□□ -0.32
FDPS-219ENST00000495308 GPR135Q8IZ08 494 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 NLGN4XQ8N0W4 816 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 IL22RA1Q8N6P7 574 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 SLC38A9Q8NBW4 561 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 NLGN4YQ8NFZ3 816 aaPredicted RBP13.03□□□□□ -0.32
FDPS-219ENST00000495308 OR56A3Q8NH54 315 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 ATL1Q8WXF7 558 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 ISL2Q96A47 359 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 KIAA1191Q96A73 305 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 RHBDF1Q96CC6 855 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 TSNARE1Q96NA8 513 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 OR4K3Q96R72 315 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 PLCD4Q9BRC7 762 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 NMRAL1Q9HBL8 299 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 STARD5Q9NSY2 213 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 IRAK4Q9NWZ3 460 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 SERTAD3Q9UJW9 196 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 RNF112Q9ULX5 631 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 CCDC88CQ9P219 2028 aa13.03□□□□□ -0.32
FDPS-219ENST00000495308 PTPRQQ9UMZ3 2332 aa13.02□□□□□ -0.32
FDPS-219ENST00000495308 LOC101059948A0A1B0GTJ6 334 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 H7BY64 318 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 ZNF749O43361 778 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 KRT37O76014 449 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 KLHL2O95198 593 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 SNRPAP09012 282 aaKnown RBP13.02□□□□□ -0.33
FDPS-219ENST00000495308 CDH1P12830 882 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 NPPBP16860 134 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 CCND1P24385 295 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 HSD17B3P37058 310 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 SLC26A3P40879 764 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 ATP1A2P50993 1020 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 VSX2P58304 361 aaPredicted RBP13.02□□□□□ -0.33
FDPS-219ENST00000495308 ABATP80404 500 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 GPS2Q13227 327 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 NAA25Q14CX7 972 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 PTCHD3Q3KNS1 767 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 ZC3H12BQ5HYM0 836 aaKnown RBP13.02□□□□□ -0.33
FDPS-219ENST00000495308 MANEAQ5SRI9 462 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 ZNF425Q6IV72 752 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 LCTLQ6UWM7 567 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 RNF44Q7L0R7 432 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 ISCA2Q86U28 154 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 C17orf64Q86WR6 236 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 PLD3Q8IV08 490 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 PLD6Q8N2A8 252 aaKnown RBP13.02□□□□□ -0.33
FDPS-219ENST00000495308 AENQ8WTP8 325 aaKnown RBP13.02□□□□□ -0.33
FDPS-219ENST00000495308 CLIP3Q96DZ5 547 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 PRAP1Q96NZ9 151 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 ATOH8Q96SQ7 321 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 ZFYVE21Q9BQ24 234 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 SELENOSQ9BQE4 189 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 TMEM79Q9BSE2 394 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 PARD6BQ9BYG5 372 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 SLC7A5P2Q9GIP4 190 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 ACTR5Q9H9F9 607 aaPredicted RBP13.02□□□□□ -0.33
FDPS-219ENST00000495308 AKIRIN1Q9H9L7 192 aaPredicted RBP13.02□□□□□ -0.33
FDPS-219ENST00000495308 CPNE5Q9HCH3 593 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 ZNF358Q9NW07 568 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 ANKMY1Q9P2S6 941 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 PSMC3IPQ9P2W1 217 aaPredicted RBP13.02□□□□□ -0.33
FDPS-219ENST00000495308 TBK1Q9UHD2 729 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 PCDHB3Q9Y5E6 796 aa13.02□□□□□ -0.33
FDPS-219ENST00000495308 LOC105369274A0A096LPK9 316 aa13.01□□□□□ -0.33
FDPS-219ENST00000495308 LOC102723532A0A0G2JNH3 316 aa13.01□□□□□ -0.33
FDPS-219ENST00000495308 SMIM23A6NLE4 172 aa13.01□□□□□ -0.33
FDPS-219ENST00000495308 SUPT3HB4E1H0 165 aa13.01□□□□□ -0.33
FDPS-219ENST00000495308 UBXN8O00124 270 aa13.01□□□□□ -0.33
FDPS-219ENST00000495308 TAPBPO15533 448 aa13.01□□□□□ -0.33
FDPS-219ENST00000495308 ZSCAN9O15535 394 aaPredicted RBP13.01□□□□□ -0.33
FDPS-219ENST00000495308 SUPT3HO75486 399 aa13.01□□□□□ -0.33
FDPS-219ENST00000495308 RFPL1O75677 317 aa13.01□□□□□ -0.33
FDPS-219ENST00000495308 WDR47O94967 919 aa13.01□□□□□ -0.33
FDPS-219ENST00000495308 S100BP04271 92 aaPredicted RBP13.01□□□□□ -0.33
FDPS-219ENST00000495308 ATXN8OSP0DMR3 200 aa13.01□□□□□ -0.33
FDPS-219ENST00000495308 WT1P19544 449 aaPredicted RBP13.01□□□□□ -0.33
FDPS-219ENST00000495308 STAT5AP42229 794 aa13.01□□□□□ -0.33
FDPS-219ENST00000495308 GDF5P43026 501 aa13.01□□□□□ -0.33
FDPS-219ENST00000495308 SLC6A12P48065 614 aa13.01□□□□□ -0.33
FDPS-219ENST00000495308 HNMTP50135 292 aa13.01□□□□□ -0.33
FDPS-219ENST00000495308 MEF2AQ02078 507 aaPredicted RBP13.01□□□□□ -0.33
FDPS-219ENST00000495308 MAP7Q14244 749 aa13.01□□□□□ -0.33
FDPS-219ENST00000495308 FAM83EQ2M2I3 478 aa13.01□□□□□ -0.33
FDPS-219ENST00000495308 BROXQ5VW32 411 aa13.01□□□□□ -0.33
FDPS-219ENST00000495308 FBXO42Q6P3S6 717 aa13.01□□□□□ -0.33
FDPS-219ENST00000495308 FAM199XQ6PEV8 388 aaPredicted RBP13.01□□□□□ -0.33
FDPS-219ENST00000495308 CCDC91Q7Z6B0 441 aa13.01□□□□□ -0.33
FDPS-219ENST00000495308 THOC6Q86W42 341 aaKnown RBP13.01□□□□□ -0.33
FDPS-219ENST00000495308 OR4N4Q8N0Y3 316 aa13.01□□□□□ -0.33
FDPS-219ENST00000495308 ZNF655Q8N720 491 aaPredicted RBP13.01□□□□□ -0.33
FDPS-219ENST00000495308 PDPRQ8NCN5 879 aa13.01□□□□□ -0.33
FDPS-219ENST00000495308 STAG3L4Q8TBR4 150 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms