RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, human

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRAT1-205	ENST00000473879	CXorf40B	Q96DE9	158 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	SLC38A3	Q99624	504 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	HGH1	Q9BTY7	390 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	TRIM55	Q9BYV6	548 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	TWSG1	Q9GZX9	223 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	UCK1	Q9HA47	277 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	THSD1	Q9NS62	852 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	KCNK4	Q9NYG8	393 aa		12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	SCHIP1	Q9P0W5	487 aa	Predicted RBP	12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	TDRKH	Q9Y2W6	561 aa	Known RBP	12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	CFAP20	Q9Y6A4	193 aa	Known RBP	12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	ANKRD11	Q6UB99	2663 aa	Predicted RBP	12.82	□□□□□ -0.36
BRAT1-205	ENST00000473879	LRRC14B	A6NHZ5	514 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	OR52A4P	A6NMU1	304 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	CDRT15L2	A8MXV6	281 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	SLCO1B7	G3V0H7	640 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	NDUFAB1	O14561	156 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	PLD2	O14939	933 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	WDR47	O94967	919 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	SLC16A8	O95907	504 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	CHRNG	P07510	517 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	EPB42	P16452	691 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	XRCC1	P18887	633 aa	Predicted RBP	12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	CCND1	P24385	295 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	SLC6A12	P48065	614 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	PNLIPRP1	P54315	467 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	PKNOX1	P55347	436 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	PCBP4	P57723	403 aa	Known RBP	12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	GTF2H2	Q13888	395 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	PTCHD3	Q3KNS1	767 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	CCSMST1	Q4G0I0	132 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	FBXO48	Q5FWF7	155 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	GTF2H2C	Q6P1K8	395 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	DUS1L	Q6P1R4	473 aa	Known RBP	12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	ZNF574	Q6ZN55	896 aa	Predicted RBP	12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	LRRC69	Q6ZNQ3	347 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	USP53	Q70EK8	1073 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	GOLGA7	Q7Z5G4	137 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	TRIM48	Q8IWZ4	208 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	SYTL1	Q8IYJ3	562 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	TEX9	Q8N6V9	391 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	PIWIL2	Q8TC59	973 aa	Known RBP	12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	BCAS4	Q8TDM0	211 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	DCBLD2	Q96PD2	775 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	CCT8L2	Q96SF2	557 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	SORT1	Q99523	831 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	NUDT22	Q9BRQ3	303 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	SIKE1	Q9BRV8	207 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	C20orf27	Q9GZN8	174 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	SEMA6C	Q9H3T2	930 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	SEMA4B	Q9NPR2	832 aa	Predicted RBP	12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	POT1	Q9NUX5	634 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	DNAJC11	Q9NVH1	559 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	CPNE7	Q9UBL6	633 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	HAO1	Q9UJM8	370 aa		12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	RALY	Q9UKM9	306 aa	Known RBP	12.81	□□□□□ -0.36
BRAT1-205	ENST00000473879	KIF26B	Q2KJY2	2108 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	PMS2P1	A4D2B8	440 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	RRP9	O43818	475 aa	Known RBP	12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	TNFSF15	O95150	251 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	OTC	P00480	354 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	ERG	P11308	486 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	RPL14	P50914	215 aa	Known RBP	12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	EPHA4	P54764	986 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	CDH13	P55290	713 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	CFHR1	Q03591	330 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	PRKG2	Q13237	762 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	TRA2A	Q13595	282 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	C18orf21	Q32NC0	220 aa	Predicted RBP	12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	GKAP1	Q5VSY0	366 aa	Predicted RBP	12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	NKAIN2	Q5VXU1	208 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	CAPN13	Q6MZZ7	669 aa	Predicted RBP	12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	CUZD1	Q86UP6	607 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	RBM12B	Q8IXT5	1001 aa	Known RBP	12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	SNX31	Q8N9S9	440 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	ZNF248	Q8NDW4	579 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	OR4D9	Q8NGE8	314 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	OR56A3	Q8NH54	315 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	OR10G6	Q8NH81	332 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	TRPC4AP	Q8TEL6	797 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	ZNF473	Q8WTR7	871 aa	Known RBP	12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	ZNF480	Q8WV37	535 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	ZFPM2	Q8WW38	1151 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	ESAM	Q96AP7	390 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	MED8	Q96G25	268 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	AHCYL2	Q96HN2	611 aa	Known RBP	12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	FAR2	Q96K12	515 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	MAGEB10	Q96LZ2	347 aa	Predicted RBP	12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	NSUN5	Q96P11	429 aa	Known RBP	12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	ZNF382	Q96SR6	550 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	CMKLR1	Q99788	373 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	ATG10	Q9H0Y0	220 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	EPB41L1	Q9H4G0	881 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	KIR3DX1	Q9H7L2	352 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	ZNF395	Q9H8N7	513 aa	Predicted RBP	12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	MID1IP1	Q9NPA3	183 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	CCDC177	Q9NQR7	707 aa	Predicted RBP	12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	ACSS2	Q9NR19	701 aa		12.8	□□□□□ -0.36
BRAT1-205	ENST00000473879	ZNF624	Q9P2J8	865 aa	Predicted RBP	12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 53 ms