RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 GSTM2P28161 218 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 EPHA8P29322 1005 aaPredicted RBP12.29□□□□□ -0.44
TRAF4-208ENST00000469529 SERPINB3P29508 390 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 HMOX2P30519 316 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 SERPINB1P30740 379 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 PIK3CBP42338 1070 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 EPHA4P54764 986 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 HHEXQ03014 270 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 GPR18Q14330 331 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 NR1D2Q14995 579 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 NAA25Q14CX7 972 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 ZRSR2Q15696 482 aaKnown RBP12.29□□□□□ -0.44
TRAF4-208ENST00000469529 HIST2H2ACQ16777 129 aaPredicted RBP12.29□□□□□ -0.44
TRAF4-208ENST00000469529 HLA-BQ31612 363 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 LSM12Q3MHD2 195 aaKnown RBP12.29□□□□□ -0.44
TRAF4-208ENST00000469529 C14orf28Q4W4Y0 310 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 C6orf132Q5T0Z8 1188 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 FRG2Q64ET8 278 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 ICE2Q659A1 982 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 HIST2H2AA3Q6FI13 130 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 KLHL35Q6PF15 583 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 SUSD1Q6UWL2 747 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 DBX2Q6ZNG2 339 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 ZNF438Q7Z4V0 828 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 C17orf64Q86WR6 236 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 FAM181AQ8N9Y4 354 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 OR4E2Q8NGC2 313 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 OR6C4Q8NGE1 309 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 FLVCR1-AS1Q8TAF5 88 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 REPS1Q96D71 796 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 C19orf60Q96EN9 201 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 CDK15Q96Q40 435 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 LRRC37BQ96QE4 947 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 FRG2BQ96QU4 278 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 KCNA7Q96RP8 456 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 RAB33BQ9H082 229 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 RHBGQ9H310 441 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 EPB41L1Q9H4G0 881 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 BRF2Q9HAW0 419 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 RIC8BQ9NVN3 520 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 NLGN3Q9NZ94 848 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 ANKMY1Q9P2S6 941 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 ZNF490Q9ULM2 529 aaPredicted RBP12.29□□□□□ -0.44
TRAF4-208ENST00000469529 PLAGL1Q9UM63 463 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 SNX7Q9UNH6 387 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 TRIM33Q9UPN9 1127 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 DOLKQ9UPQ8 538 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 TIMM22Q9Y584 194 aa12.29□□□□□ -0.44
TRAF4-208ENST00000469529 CFAP54Q96N23 3096 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 CCT8L1PA6NM43 557 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 E7EQ34 232 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 BTN3A3O00478 584 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 PIP5K1BO14986 540 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 PPM1DO15297 605 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 DIAPH2O60879 1101 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 JUNP05412 331 aaKnown RBP12.28□□□□□ -0.44
TRAF4-208ENST00000469529 RETP07949 1114 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 ACPPP15309 386 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 PNLIPP16233 465 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 GPR3P46089 330 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 ID4P47928 161 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 CCR8P51685 355 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 BNIP3Q12983 259 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 SQSTM1Q13501 440 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 ABRAXAS2Q15018 415 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 SLC5A12Q1EHB4 618 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 PLA2G2CQ5R387 149 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 VWA5B1Q5TIE3 1220 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 MED27Q6P2C8 311 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 TRPM8Q7Z2W7 1104 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 YTHDF3Q7Z739 585 aaKnown RBP12.28□□□□□ -0.44
TRAF4-208ENST00000469529 KRT78Q8N1N4 520 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 OR2L3Q8NG85 312 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 OR7G3Q8NG95 312 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 ZUFSPQ96AP4 578 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 THOC1Q96FV9 657 aaKnown RBP12.28□□□□□ -0.44
TRAF4-208ENST00000469529 C3orf30Q96M34 536 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 OR52B2Q96RD2 323 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 TUBB6Q9BUF5 446 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 WDR55Q9H6Y2 383 aaPredicted RBP12.28□□□□□ -0.44
TRAF4-208ENST00000469529 UCKL1Q9NWZ5 548 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 GEMIN8Q9NWZ8 242 aaKnown RBP12.28□□□□□ -0.44
TRAF4-208ENST00000469529 SIRT5Q9NXA8 310 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 EPHA6Q9UF33 1036 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 CIDEBQ9UHD4 219 aa12.28□□□□□ -0.44
TRAF4-208ENST00000469529 LRP4O75096 1905 aa12.27□□□□□ -0.44
TRAF4-208ENST00000469529 TRBV23OR9-2A0A075B6M9 112 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 PIPSLA2A3N6 862 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 OR5K3A6NET4 321 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 RGS14O43566 566 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 CER1O95813 267 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 LBPP18428 481 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 EPHA3P29320 983 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 CMPK1P30085 196 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 PEBP1P30086 187 aaKnown RBP12.27□□□□□ -0.45
TRAF4-208ENST00000469529 ATP4BP51164 291 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 EMX2Q04743 252 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 CSTF3Q12996 717 aaKnown RBP12.27□□□□□ -0.45
TRAF4-208ENST00000469529 IFT88Q13099 833 aa12.27□□□□□ -0.45
TRAF4-208ENST00000469529 KRT72Q14CN4 511 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms